Results for the Category
nuclear replication fork
(GO:0043596)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| PCNA | 2 | -0.730 | 0.380 | 0.679 | 1.154 | 0.572 | 0.718 | 0.782 |
| SMARCAD1 | 2 | 0.070 | 0.540 | -0.030 | 1.060 | 0.612 | 0.381 | 0.353 |
| TONSL | 1 | -1.900 | 3.540 | -0.261 | -3.160 | 0.665 | 1.051 | |
| ZRANB3 | 0 | -0.760 | 1.140 | |||||
| ZMIZ2 | 0 | -0.240 | 0.580 | |||||
| MMS22L | 0 | 0.598 | 0.329 | |||||
| SMARCA5 | 0 | 0.420 | -0.750 | 0.381 | 0.398 | 0.759 | 0.628 | 0.494 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| PCNA | Ubiquitylation | K13 | 0.209 | 2.207 | _LVQGSILK(gl)K_ |
| PCNA | Ubiquitylation | K14 | 0.233 | 2.833 | _LVQGSILKK(gl)_ |
| PCNA | Ubiquitylation | K80 | 0.570 | 1.579 | _ILK(gl)CAGNEDIITLR_ |
| PCNA | Ubiquitylation | K164 | 2.309 | 2.671 | _DLSHIGDAVVISCAK(gl)DGVK_ |
| PCNA | Ubiquitylation | K168 | 2.484 | 2.645 | _DLSHIGDAVVISCAKDGVK(gl)_ |
| PCNA | Ubiquitylation | K248 | 0.226 | 0.515 | _IADMGHLK(gl)YYLAPK_ |
| SMARCA5 | Phosphorylation | S66 | -0.501 | -0.553 | _GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(ph)PGKQK_ |
| SMARCA5 | Phosphorylation | S116 | 0.045 | -0.051 | _TPTS(ph)PLK_ |
| SMARCA5 | Ubiquitylation | K160 | 0.340 | _TEQEEDEELLTESSK(gl)ATNVCTR_ | |
| SMARCA5 | Ubiquitylation | K319 | -0.811 | _SK(gl)LSEIVR_ | |
| SMARCA5 | Ubiquitylation | K691 | 0.305 | _KTAEMNEK(gl)LSK_ | |
| SMARCA5 | Ubiquitylation | K694 | 1.235 | _LSK(gl)MGESSLR_ | |
| SMARCA5 | Ubiquitylation | K799 | 0.558 | 0.382 | _TIGYK(gl)VPR_ |
| SMARCA5 | Ubiquitylation | K847 | 0.509 | _LLTQGFTNWNK(gl)R_ | |
| SMARCA5 | Ubiquitylation | K855 | 0.872 | _DFNQFIK(gl)ANEK_ | |
| SMARCA5 | Ubiquitylation | K929 | 0.067 | -1.279 | _YK(gl)APFHQLR_ |
| SMARCAD1 | Phosphorylation | T54 | -0.579 | -0.089 | _ANT(ph)PDSDITEK_ |
| SMARCAD1 | Phosphorylation | S79 | 1.866 | 0.866 | _KAS(ph)ISYFK_ |
| SMARCAD1 | Phosphorylation | S95 | -0.165 | _GIQYIDLS(ph)SDSEDVVSPNCSNTVQEK_ | |
| SMARCAD1 | Phosphorylation | S152 | 1.382 | 1.569 | _RNDDISELEDLS(ph)ELEDLKDAK_ |
| SMARCAD1 | Phosphorylation | S211 | 0.248 | _KLS(ph)SSSEPYEEDEFNDDQSIKK_ | |
| TONSL | Ubiquitylation | K336 | -1.432 | _AAEAYQK(gl)QLR_ | |
| TONSL | Phosphorylation | S719 | -0.359 | -0.212 | _VS(ph)PGQAAPAMARPR_ |
| ZMIZ2 | Ubiquitylation | K559 | -0.155 | _SVLQGLLKK(gl)_ | |
| ZRANB3 | Ubiquitylation | K163 | -0.845 | _VVIVDESHYMK(gl)SR_ | |
| ZRANB3 | Ubiquitylation | K179 | -1.035 | _ILLPIVQK(gl)AR_ |
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© Copyright Svejstrup Laboratory 2015