Results for the Category
ribosomal large subunit biogenesis
(GO:0042273)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| RPL7 | 2 | -0.860 | 1.650 | -0.338 | 0.500 | 1.238 | -0.454 | 0.086 |
| RPL14 | 2 | -0.585 | ||||||
| RPL14 | 2 | 0.161 | 0.399 | 1.051 | -0.010 | 0.024 | ||
| RPL5 | 1 | 0.077 | -0.280 | 0.082 | ||||
| RPL5 | 1 | 0.183 | 0.751 | |||||
| RPL26L1 | 1 | -0.160 | 0.510 | -0.332 | 0.958 | -0.508 | -0.307 | -0.009 |
| RPL35A | 1 | -0.780 | 1.110 | 0.497 | 0.077 | -0.240 | ||
| PES1 | 0 | 0.000 | 0.210 | -1.535 | -0.358 | |||
| SBDS | 0 | 0.910 | -0.950 | -0.390 | -0.228 | 0.247 | ||
| WDR12 | 0 | 0.150 | -0.420 | -1.387 | -0.346 | |||
| RPL11 | 0 | -0.210 | 0.230 | 0.115 | 0.398 | 0.883 | -0.361 | -0.495 |
| MALSU1 | 0 | -0.220 | 0.680 | -0.833 | -0.520 | |||
| SDAD1 | 0 | -0.100 | 0.270 | -0.764 | 0.161 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| PES1 | Ubiquitylation | K98 | -0.002 | _AYGK(gl)SEWNTVER_ | |
| PES1 | Ubiquitylation | K533 | 0.504 | 1.270 | _LAQEEESEAK(gl)R_ |
| RPL11 | Ubiquitylation | K8 | -0.287 | -0.982 | _(ac)AQDQGEK(gl)ENPM(ox)R_ |
| RPL11 | Ubiquitylation | K52 | 0.253 | 0.130 | _VLEQLTGQTPVFSK(gl)AR_ |
| RPL11 | Ubiquitylation | K67 | 0.460 | 0.343 | _NEK(gl)IAVHCTVR_ |
| RPL11 | Ubiquitylation | K78 | 1.198 | 0.854 | _GAK(gl)AEEILEK_ |
| RPL11 | Ubiquitylation | K85 | -0.347 | 0.145 | _AEEILEK(gl)GLK_ |
| RPL11 | Ubiquitylation | K88 | 0.295 | _AEEILEKGLK(gl)_ | |
| RPL11 | Ubiquitylation | K144 | 0.153 | 0.622 | _PGFSIADK(gl)K_ |
| RPL11 | Ubiquitylation | K145 | -0.291 | 1.240 | _PGFSIADKK(gl)R_ |
| RPL11 | Ubiquitylation | K154 | 0.904 | _TGCIGAK(gl)HR_ | |
| RPL11 | Ubiquitylation | K159 | -0.008 | 0.322 | _ISK(gl)EEAMR_ |
| RPL11 | Ubiquitylation | K169 | -0.196 | _WFQQK(gl)YDGIILPGK_ | |
| RPL11 | Ubiquitylation | K178 | -0.182 | -0.325 | _YDGIILPGK(gl)_ |
| RPL14 | Ubiquitylation | K79 | 1.642 | _QAWQK(gl)ADINTK_ | |
| RPL14 | Ubiquitylation | K85 | 1.938 | 1.551 | _ADINTK(gl)WAATR_ |
| RPL14 | Ubiquitylation | K129 | 0.877 | _IIKNEVKK(gl)_ | |
| RPL14 | Ubiquitylation | K132 | 2.343 | _KLQK(gl)AALLK_ | |
| RPL14 | Ubiquitylation | K137 | 0.263 | 1.745 | _AALLK(gl)ASPK_ |
| RPL14 | Phosphorylation | S139 | -0.318 | 0.001 | _AALLKAS(ph)PK_ |
| RPL26L1 | Ubiquitylation | K2 | 0.559 | 2.195 | _MK(gl)FNPFVTSDR_ |
| RPL26L1 | Ubiquitylation | K28 | 2.091 | _K(gl)IMSSPLSK_ | |
| RPL26L1 | Ubiquitylation | K36 | 0.814 | 2.280 | _IMSSPLSK(gl)ELR_ |
| RPL26L1 | Ubiquitylation | K51 | -0.134 | 0.771 | _SMPIRK(gl)DDEVQVVR_ |
| RPL26L1 | Ubiquitylation | K69 | 0.126 | 1.684 | _GQQIGK(gl)VVQVYR_ |
| RPL26L1 | Ubiquitylation | K134 | 0.741 | _GK(gl)YKEETIEK_ | |
| RPL26L1 | Ubiquitylation | K136 | 0.534 | _GKYK(gl)EETIEK_ | |
| RPL35A | Ubiquitylation | K15 | 1.064 | _AIFAGYK(gl)R_ | |
| RPL35A | Ubiquitylation | K45 | 0.279 | 1.111 | _DETEFYLGK(gl)R_ |
| RPL35A | Ubiquitylation | K54 | 1.472 | 1.347 | _AK(gl)NNTVTPGGK(gl)PNK_ |
| RPL35A | Ubiquitylation | K63 | 1.472 | 1.347 | _AK(gl)NNTVTPGGK(gl)PNK_ |
| RPL35A | Ubiquitylation | K66 | 0.586 | 0.165 | _NNTVTPGGKPNK(gl)TR_ |
| RPL35A | Ubiquitylation | K73 | 1.181 | _VIWGK(gl)VTR_ | |
| RPL35A | Ubiquitylation | K95 | 1.550 | 1.407 | _SNLPAK(gl)AIGHR_ |
| RPL5 | Ubiquitylation | K5 | 0.802 | 1.170 | _GFVK(gl)VVK_ |
| RPL5 | Ubiquitylation | K27 | 0.560 | 1.718 | _EGK(gl)TDYYAR_ |
| RPL5 | Ubiquitylation | K41 | -0.434 | 0.969 | _LVIQDK(gl)NK(gl)YNTPK_ |
| RPL5 | Ubiquitylation | K43 | -0.569 | 0.490 | _LVIQDK(gl)NK(gl)YNTPK_ |
| RPL5 | Ubiquitylation | K158 | -0.388 | 1.405 | _TTTGNK(gl)VFGALK_ |
| RPL5 | Ubiquitylation | K178 | -0.152 | 1.436 | _GAVDGGLSIPHSTK(gl)R_ |
| RPL5 | Ubiquitylation | K221 | 0.554 | 1.466 | _YLMEEDEDAYKK(gl)_ |
| RPL5 | Ubiquitylation | K247 | 1.281 | _NSVTPDMEEMYK(gl)K_ | |
| RPL5 | Ubiquitylation | K248 | 1.276 | _NSVTPDMEEMYKK(gl)_ | |
| RPL5 | Ubiquitylation | K255 | -0.684 | 0.578 | _ENPVYEK(gl)KPK_ |
| RPL5 | Ubiquitylation | K270 | 0.648 | _WNRPK(gl)MSLAQK_ | |
| RPL5 | Ubiquitylation | K277 | 1.110 | _MSLAQKK(gl)_ | |
| RPL7 | Ubiquitylation | K7 | 2.298 | 2.448 | _(ac)MEGVEEK(gl)KK_ |
| RPL7 | Ubiquitylation | K19 | 1.588 | 1.597 | _KKEVPAVPETLK(gl)K_ |
| RPL7 | Ubiquitylation | K20 | 1.789 | 1.742 | _EVPAVPETLKK(gl)_ |
| RPL7 | Ubiquitylation | K29 | 2.221 | 2.276 | _NFAELK(gl)IKR_ |
| RPL7 | Ubiquitylation | K31 | 8.375 | 2.017 | _NFAELKIK(gl)_ |
| RPL7 | Ubiquitylation | K40 | 2.823 | 2.441 | _FAQK(gl)MLR_ |
| RPL7 | Ubiquitylation | K53 | 2.249 | 2.439 | _LIYEK(gl)AK_ |
| RPL7 | Ubiquitylation | K55 | 2.449 | 2.478 | _LIYEKAK(gl)_ |
| RPL7 | Ubiquitylation | K77 | 1.793 | 1.440 | _K(gl)AGNFYVPAEPK_ |
| RPL7 | Ubiquitylation | K107 | 2.407 | _K(gl)VLQLLR_ | |
| RPL7 | Ubiquitylation | K124 | 1.473 | _QIFNGTFVK(gl)LNK_ | |
| RPL7 | Ubiquitylation | K127 | 2.920 | 2.270 | _LNK(gl)ASINMLR_ |
| RPL7 | Ubiquitylation | K156 | 2.427 | _SVNELIYK(gl)R_ | |
| RPL7 | Ubiquitylation | K161 | 1.987 | _GYGK(gl)INK_ | |
| SBDS | Phosphorylation | T5 | -1.684 | _(ac)SIFT(ph)PTNQIR_ | |
| SBDS | Ubiquitylation | K35 | 0.900 | _RFEIACYKNK(gl)_ | |
| SBDS | Ubiquitylation | K90 | 0.641 | _QILTK(gl)GEVQVSDKER_ | |
| SBDS | Ubiquitylation | K118 | -0.751 | _DIATIVADK(gl)CVNPETK_ | |
| SBDS | Ubiquitylation | K138 | 1.026 | _AMK(gl)DIHYSVK_ | |
| SBDS | Ubiquitylation | K151 | 0.552 | _STK(gl)QQALEVIK_ | |
| SBDS | Ubiquitylation | K159 | 0.900 | _QQALEVIK(gl)QLK_ | |
| SBDS | Ubiquitylation | K226 | 1.011 | _EIDELIKK(gl)_ | |
| SDAD1 | Phosphorylation | S585 | 0.350 | 0.522 | _YIEIDS(ph)DEEPRGELLSLR_ |
| WDR12 | Ubiquitylation | K14 | 0.676 | 1.025 | _FYTDNKK(gl)_ |
| WDR12 | Ubiquitylation | K310 | 0.195 | _VFNCISYSPLCK(gl)R_ |
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© Copyright Svejstrup Laboratory 2015