RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
TOP1	3	0.970	-0.880
TOP1	3	0.970	-0.880	0.567	0.872	1.232	0.631	0.425
CUL3	2	2.600	-1.300	0.182	-0.454	0.077	-0.259	-0.135
ERCC2	2	-0.590	1.060	-0.491		1.066
TOP2A	1	-1.940	3.540
TOP2A	1	-1.940	3.540	-1.993			0.211	0.211
PIK3CB	0	-1.390	2.350
PIK3CB	0	-0.710	1.450
AATF	0						0.062	0.323

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AATF	Phosphorylation	S203	0.544	0.457	_AGDRNS(ph)EDDGVVMTFSSVK_
AATF	Ubiquitylation	K283		0.128	_ALK(gl)ALLR_
AATF	Ubiquitylation	K475		0.282	_K(gl)TSSLDPNDQVAMGR_
AATF	Ubiquitylation	K496		0.572	_QWLAIQK(gl)LR_
CUL3	Ubiquitylation	K6		-0.611	_(ac)SNLSK(gl)GTGSR_
CUL3	Ubiquitylation	K236	1.952	0.663	_FLAENSASVYIKK(gl)_
CUL3	Ubiquitylation	K262	-0.525	-0.203	_STEEPIVK(gl)VVER_
CUL3	Ubiquitylation	K292	1.094	0.852	_NGK(gl)TEDLGCMYK_
CUL3	Ubiquitylation	K459		0.752	_LK(gl)TECGCQFTSK_
CUL3	Ubiquitylation	K680	-1.024		_IQTVAAK(gl)QGESDPERK_
ERCC2	Ubiquitylation	K268	5.973	1.957	_CQGNLETLQK(gl)TVLR_
ERCC2	Ubiquitylation	K507		-2.034	_GNDQVAISSK(gl)FETR_
PIK3CB	Ubiquitylation	K1044		0.990	_SEEEALKQFKQK(gl)_
TOP1	Phosphorylation	S10	0.973	1.937	_(ac)SGDHLHNDS(ph)QIEADFR_
TOP1	Ubiquitylation	K245	2.277		_FYYDGK(gl)VMK_
TOP1	Ubiquitylation	K252		1.900	_LSPK(gl)AEEVATFFAK_
TOP1	Ubiquitylation	K391	0.019		_DAK(gl)VPSPPPGHK_
TOP1	Ubiquitylation	K545	2.178		_YYNKVPVEK(gl)R_
TOP1	Ubiquitylation	K642	2.317		_TFEK(gl)SMMNLQTK_
TOP2A	Phosphorylation	S4	-0.623	-0.424	_(ac)M(ox)EVS(ph)PLQPVNENM(ox)QVNK_
TOP2A	Ubiquitylation	K17	-0.250		_(ac)MEVSPLQPVNENMQVNK(gl)IKK_
TOP2A	Ubiquitylation	K96		0.284	_IFDEILVNAADNK(gl)QR_
TOP2A	Ubiquitylation	K131	0.553	-0.638	_GIPVVEHK(gl)VEK_
TOP2A	Ubiquitylation	K386	-2.203		_ENMTLQPK(gl)SFGSTCQLSEK_
TOP2A	Ubiquitylation	K397	0.214	0.360	_SFGSTCQLSEK(gl)FIK_
TOP2A	Ubiquitylation	K426		-0.502	_AQVQLNKK(gl)_
TOP2A	Ubiquitylation	K489	-0.029	0.171	_GK(gl)ILNVR_
TOP2A	Ubiquitylation	K520		-0.260	_IVGLQYKK(gl)_
TOP2A	Ubiquitylation	K529	0.862	0.065	_NYEDEDSLK(gl)TLR_
TOP2A	Ubiquitylation	K614		-0.287	_YYK(gl)GLGTSTSK_
TOP2A	Ubiquitylation	K622		-0.581	_GLGTSTSK(gl)EAK_
TOP2A	Ubiquitylation	K632	-0.171	-0.248	_EYFADMK(gl)R_
TOP2A	Ubiquitylation	K655	-0.091	-0.407	_YSGPEDDAAISLAFSK(gl)K_
TOP2A	Ubiquitylation	K656	-0.091	-0.441	_YSGPEDDAAISLAFSKK(gl)_
TOP2A	Ubiquitylation	K723		-1.207	_SIPSMVDGLK(gl)PGQR_
TOP2A	Ubiquitylation	K1088		0.061	_GYDSDPVK(gl)AWK_
TOP2A	Phosphorylation	S1142	0.072	0.040	_VPDEEENEES(ph)DNEKETEK_
TOP2A	Ubiquitylation	K1159	-0.411	-0.659	_EQELDTLK(gl)R_
TOP2A	Ubiquitylation	K1199	-0.674	-1.759	_EKQDEQVGLPGKGGK(gl)_
TOP2A	Phosphorylation	S1249	-0.907	-0.546	_TQMAEVLPS(ph)PR_
TOP2A	Phosphorylation	S1283	0.168	0.028	_NENTEGS(ph)PQEDGVELEGLK_
TOP2A	Phosphorylation	S1411	0.232	-0.105	_S(ph)VVSDLEADDVK_
TOP2A	Phosphorylation	S1414	0.884	0.877	_SVVS(ph)DLEADDVK_
TOP2A	Phosphorylation	S1429	-1.415	-2.977	_GSVPLSS(ph)SPPATHFPDETEITNPVPK_
TOP2A	Phosphorylation	S1430		-1.317	_GSVPLSSS(ph)PPATHFPDETEITNPVPK_
TOP2A	Phosphorylation	T1434	-1.348		_GSVPLSSSPPAT(ph)HFPDETEITNPVPK_
TOP2A	Phosphorylation	S1506		-0.384	_RKPS(ph)TSDDSDSNFEK_