RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
VPS13A	2	-2.100	4.280				0.799	-0.026
DLG4	1	-0.020	0.320	1.552			0.102	0.488
KRAS	1	-0.510	0.620				1.031	0.887
KRAS	1	-0.510	0.620				0.246	-0.346
ANXA7	1	-1.410	3.550	0.673			0.422	-0.159
HTT	1	-0.200	-0.360	0.632			0.847	0.550
MAPK8IP2	0	1.730	-1.220
PPP3CB	0	-1.240	2.140		-0.298	1.130
PPP3CB	0	-1.240	2.140				0.923	0.537
HRAS	0	1.470	-0.520
GNB1L	0	0.540	-0.860
DNAJC9	0	-0.940	0.650				-0.441	0.014

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ANXA7	Ubiquitylation	K199	0.347		_AMK(gl)GFGTDEQAIVDVVANR_
ANXA7	Ubiquitylation	K430	0.263	0.610	_LYYAMK(gl)GAGTDDSTLVR_
DLG4	Phosphorylation	S102	-1.455		_SKPSEPIQPVNTWEISSLPSSTVTSETLPSSLS(ph)PSVEK_
DLG4	Phosphorylation	T115	-0.707	-1.378	_YQDEDT(ph)PPQEHISPQITNEVIGPELVHVSEK_
DLG4	Phosphorylation	S122		-1.073	_YQDEDTPPQEHIS(ph)PQITNEVIGPELVHVSEK_
DLG4	Phosphorylation	S158		0.773	_NLSEIENVHGFVSHSHIS(ph)PIK_
DLG4	Ubiquitylation	K321	1.264	1.435	_IMEIK(gl)LIK_
DLG4	Ubiquitylation	K361	0.180		_IIEGGAAHK(gl)DGK_
DLG4	Ubiquitylation	K452	-0.704		_YSPVSK(gl)AVLGDDEITREPR_
DLG4	Ubiquitylation	K556	0.105		_FEAK(gl)IHDLR_
DLG4	Phosphorylation	S573	0.697		_EQM(ox)M(ox)NSSISSGS(ph)GSLR_
DLG4	Phosphorylation	S575	0.255	0.729	_EQMMNSSISSGSGS(ph)LR_
DLG4	Ubiquitylation	K843	1.259		_SMENIMEMNK(gl)R_
DNAJC9	Phosphorylation	S109		1.143	_KIS(ph)LEDIQAFEK_
GNB1L	Ubiquitylation	K155		-0.889	_TSVCALK(gl)PK_
HRAS	Ubiquitylation	K170	-1.005		_K(gl)LNPPDESGPGCMSCK_
HTT	Ubiquitylation	K260		-0.128	_AFIANLK(gl)_
HTT	Phosphorylation	S419	0.595	0.531	_SGS(ph)IVELIAGGGSSCS(ph)PVLSR_
HTT	Phosphorylation	S430	0.402	0.494	_SGSIVELIAGGGSS(ph)CSPVLSR_
HTT	Phosphorylation	S432	0.317	0.640	_SGSIVELIAGGGSSCS(ph)PVLSR_
HTT	Phosphorylation	S1195	-0.222	0.264	_EKEPGEQAS(ph)VPLSPK_
HTT	Phosphorylation	S1199	-0.456	-0.970	_GKEKEPGEQASVPLS(ph)PK_
HTT	Ubiquitylation	K1402	0.169	-0.538	_VSTQLK(gl)TNLTSVTK_
HTT	Phosphorylation	S1874	1.994	1.028	_LLSPQMS(ph)GEEEDSDLAAK_
KRAS	Ubiquitylation	K128	1.528	1.433	_TVDTK(gl)QAHELAK_
KRAS	Ubiquitylation	K235	0.591	0.087	_TVDTK(gl)QAQDLAR_
KRAS	Ubiquitylation	K254	-0.450	-0.156	_SYGIPFIETSAK(gl)TR_
MAPK8IP2	Ubiquitylation	K674	-0.899	0.671	_DLLGSK(gl)R_
PPP3CB	Ubiquitylation	K32	-0.137		_LTAK(gl)EVFDNDGKPR_
PPP3CB	Ubiquitylation	K56		0.132	_VDVLK(gl)NHLVK_
PPP3CB	Ubiquitylation	K323		0.705	_AAVLK(gl)YENNVMNIR_
PPP3CB	Ubiquitylation	K405		0.078	_AIGK(gl)MAR_
VPS13A	Ubiquitylation	K1748		-1.291	_TVPMLLAK(gl)SR_
VPS13A	Ubiquitylation	K1825	-0.339		_MAIVESDPEEENYK(gl)VPEYK_
VPS13A	Ubiquitylation	K2228	1.347	1.510	_MLQYK(gl)ADGIHR_
VPS13A	Ubiquitylation	K2930	0.903		_ITGAMAK(gl)GVAAMTMDEDYQQK_
VPS13A	Ubiquitylation	K2944	1.033	0.232	_GVAAMTMDEDYQQK(gl)R_
VPS13A	Ubiquitylation	K2951	0.490		_EAMNK(gl)QPAGFR_
VPS13A	Ubiquitylation	K2988	0.895		_GAQK(gl)GGAAGFFK_
VPS13A	Ubiquitylation	K3152	0.349		_IINFK(gl)TPEDAR_