RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
LDLRAP1	2	0.870	-0.890
CLINT1	1	0.090	-0.140	-0.584			-0.316	0.083
AP2B1	0	0.890	-0.970
AP2B1	0	0.890	-0.970	-0.267	0.203	0.287	0.311	0.233
SNAP91	0						0.221	0.666
PICALM	0	0.890	-0.980				0.221	0.666
PICALM	0	0.890	-0.980
TOM1	0	0.180	0.010	-0.781
NCALD	0	0.140	-0.130
SMAP1	0	-0.320	0.310
SMAP1	0	-0.210	1.460
AFTPH	0	0.310	-0.720
TOM1L1	0	-0.380	0.180
DAB2	0	0.510	-0.470
DNER	0	-0.450	-0.080

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AFTPH	Phosphorylation	S382	1.377	1.339	_TSDDEVGS(ph)PKEESR_
AP2B1	Ubiquitylation	K5	0.145	0.310	_(ac)TDSK(gl)YFTTNK_
AP2B1	Ubiquitylation	K12	0.255		_K(gl)GEIFELK_
AP2B1	Ubiquitylation	K117	-0.547		_VDK(gl)ITEYLCEPLRK_
AP2B1	Ubiquitylation	K131	0.324	-0.027	_CLK(gl)DEDPYVRK_
AP2B1	Ubiquitylation	K733		-0.273	_AVWLPAVK(gl)AK_
AP2B1	Ubiquitylation	K735	-0.839	-0.273	_AVWLPAVKAK(gl)_
CLINT1	Ubiquitylation	K6	0.944	0.734	_(ac)MLNMWK(gl)VR_
CLINT1	Ubiquitylation	K183		0.133	_SK(gl)WDEEWDKNK_
CLINT1	Ubiquitylation	K200	1.330	0.380	_SAFPFSDK(gl)LGELSDK_
CLINT1	Ubiquitylation	K207	0.681	0.218	_LGELSDK(gl)IGSTIDDTISK_
CLINT1	Ubiquitylation	K218	3.052	1.316	_IGSTIDDTISK(gl)FR_
CLINT1	Phosphorylation	S299	0.178	0.644	_TIDLGAAAHYTGDKAS(ph)PDQNASTHTPQSSVK_
CLINT1	Phosphorylation	T308	-0.947	-0.444	_ASPDQNASTHT(ph)PQSSVK_
CLINT1	Ubiquitylation	K314	0.979	-1.156	_ASPDQNASTHTPQSSVK(gl)TSVPSSK_
CLINT1	Ubiquitylation	K467	1.885	0.486	_SQNTDMVQK(gl)SVSK_
CLINT1	Ubiquitylation	K625	2.083	0.163	_QDAFANFANFSK(gl)_
DAB2	Phosphorylation	S401	-0.704	-0.722	_SSPNPFVGS(ph)PPK_
DNER	Ubiquitylation	K733		-0.847	_PLVTLIK(gl)_
LDLRAP1	Ubiquitylation	K5	6.085	8.895	_(ac)MDALK(gl)SAGR_
LDLRAP1	Phosphorylation	S14	-0.662	0.149	_ALIRS(ph)PSLAK_
NCALD	Ubiquitylation	K174	-1.077		_GAK(gl)SDPSIVR_
PICALM	Ubiquitylation	K210	-0.364	0.811	_YLNEK(gl)AVSYR_
PICALM	Phosphorylation	T294		-0.800	_KPHTSLT(ph)TAASPVSTSAGGIM(ox)TAPAIDIFSTPSSSNSTSK_
SMAP1	Phosphorylation	S152	-0.527		_NAIAITNISSSDAPLQPLVSS(ph)PSLQAAVDK_
SNAP91	Ubiquitylation	K210	-0.364	0.811	_YLNEK(gl)AVSYR_
TOM1	Ubiquitylation	K115	-1.954	-1.030	_TILPK(gl)NNPPTIVHDK_
TOM1	Ubiquitylation	K156	-0.534		_K(gl)GLEFPMTDLDMLSPIHTPQR_
TOM1	Phosphorylation	S169		0.684	_GLEFPMTDLDMLS(ph)PIHTPQR_
TOM1	Ubiquitylation	K391	-1.026		_K(gl)EVKYEAPQATDGLAGALDAR_
TOM1	Ubiquitylation	K394	-0.894	-0.078	_EVK(gl)YEAPQATDGLAGALDAR_
TOM1	Phosphorylation	S471		-0.733	_AADRLPNLSS(ph)PSAEGPPGPPSGPAPR_
TOM1L1	Ubiquitylation	K149	-0.037		_EVYLDLVKK(gl)_
TOM1L1	Ubiquitylation	K298		-1.457	_ILEQNK(gl)NQK_
TOM1L1	Ubiquitylation	K301	-1.762	-1.457	_NQK(gl)EATNTTSEPSAPSQDLLDLSPSPR_
TOM1L1	Phosphorylation	S321	0.265	-0.164	_EATNTTSEPSAPSQDLLDLS(ph)PSPR_
TOM1L1	Phosphorylation	S323	-1.219	-1.229	_EATNTTSEPSAPSQDLLDLSPS(ph)PR_