Results for the Category
5'-3' exonuclease activity
(GO:0008409)
RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
W | |||||||
Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
---|---|---|---|---|---|---|---|---|
XRN2 | 0 | 1.050 | -0.930 | -2.506 | -1.121 | -0.161 | -0.293 | -0.304 |
XRN1 | 0 | 1.680 | -1.120 | |||||
XRN1 | 0 | 1.680 | -1.120 | -0.304 | -0.943 | 0.164 | ||
DCLRE1B | 0 | 0.400 | -0.410 | |||||
CPSF3 | 0 | 0.760 | -0.720 | -0.001 | -0.206 | 0.455 | -0.433 | 0.066 |
FEN1 | 0 | -1.360 | 2.210 | 0.895 | 1.036 | -1.389 | -0.361 | -0.414 |
EXO1 | 0 | 0.890 | -0.810 |
Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
---|---|---|---|---|---|
CPSF3 | Ubiquitylation | K348 | 0.384 | _ELFESWCTDK(gl)R_ | |
CPSF3 | Ubiquitylation | K428 | 0.656 | 0.535 | _LK(gl)AALIR_ |
CPSF3 | Ubiquitylation | K465 | 0.422 | _NTEAVTLNFRGEKLAK(gl)_ | |
CPSF3 | Ubiquitylation | K474 | -0.536 | _VMGFLADKK(gl)PEQGQR_ | |
CPSF3 | Ubiquitylation | K487 | 0.072 | 0.155 | _VSGILVK(gl)R_ |
CPSF3 | Ubiquitylation | K604 | -0.159 | _K(gl)LEMHVYSK_ | |
DCLRE1B | Ubiquitylation | K420 | -1.848 | _AVPFCESQK(gl)R_ | |
EXO1 | Phosphorylation | S598 | 0.826 | _TIS(ph)PPTLGTLR_ | |
FEN1 | Ubiquitylation | K354 | 1.109 | _VTGSLSSAK(gl)R_ | |
XRN1 | Phosphorylation | S814 | -0.523 | _ENEVQSSHHGEPPSEEHLS(ph)PQSFAM(ox)K_ | |
XRN2 | Ubiquitylation | K132 | 0.183 | _EGMEAAVEK(gl)QR_ | |
XRN2 | Phosphorylation | T439 | -0.332 | -1.539 | _RDQPAFTPSGILT(ph)PHALGSR_ |
XRN2 | Phosphorylation | S448 | 0.425 | 0.037 | _NS(ph)PGSQVASNPR_ |
XRN2 | Phosphorylation | S473 | 0.104 | -0.751 | _MQNNSSPS(ph)ISPNTSFTSDGSPSPLGGIK_ |
XRN2 | Phosphorylation | S475 | 0.436 | _MQNNSSPSIS(ph)PNTSFTSDGSPSPLGGIK_ | |
XRN2 | Ubiquitylation | K493 | -1.223 | _MQNNSSPSISPNTSFTSDGSPSPLGGIK(gl)R_ | |
XRN2 | Phosphorylation | S499 | -1.444 | _AEDS(ph)DSEPEPEDNVR_ | |
XRN2 | Ubiquitylation | K533 | 0.431 | _NKFDVDAADEK(gl)FR_ |
.
© Copyright Svejstrup Laboratory 2015