RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
MBD3	0	0.730	-1.260	0.210	0.189	0.976	0.079	0.453
DNMT3B	0	0.990	-0.100				0.783	0.015
SIRT1	0	0.910	-0.910
HELLS	0	-1.320	1.650	-1.393	-0.483	-0.069	-0.340	-0.345
SMARCA4	0	-0.810	1.520	0.629	-0.158	0.141	0.337	0.333

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
DNMT3B	Ubiquitylation	K597	0.236		_ELGIK(gl)VGK_
DNMT3B	Ubiquitylation	K623	0.433		_HEGNIK(gl)YVNDVR_
HELLS	Ubiquitylation	K74	0.655		_LQHLLEK(gl)SNIYSK_
HELLS	Phosphorylation	S115		0.257	_NS(ph)IDASEEKPVMR_
HELLS	Ubiquitylation	K474		-0.723	_EVVVYAPLSK(gl)K_
HELLS	Ubiquitylation	K475		-0.723	_EVVVYAPLSK(gl)K_
HELLS	Ubiquitylation	K753	0.741		_NHFK(gl)GGQSGLNLSK_
HELLS	Ubiquitylation	K776		0.359	_ELMELLK(gl)SR_
MBD3	Ubiquitylation	K42	-0.711		_DVFYYSPSGKK(gl)_
MBD3	Phosphorylation	S56	0.663	0.474	_YLGGS(ph)MDLSTFDFR_
MBD3	Phosphorylation	S85	0.574	0.485	_VRYDS(ph)SNQVK_
MBD3	Ubiquitylation	K92	-0.542		_GK(gl)PDLNTALPVR_
MBD3	Ubiquitylation	K124	0.195		_ITNHPSNKVK(gl)_
MBD3	Ubiquitylation	K129	-0.498		_SDPQK(gl)AVDQPR_
SIRT1	Phosphorylation	S14	-0.369	-0.246	_(ac)ADEAALALQPGGS(ph)PSAAGADR_
SIRT1	Phosphorylation	S16	-0.306	-1.665	_(ac)ADEAALALQPGGS(ph)PS(ph)AAGADREAASSPAGEPLR_
SIRT1	Phosphorylation	S26	-1.047	-0.245	_EAAS(ph)SPAGEPLR_
SIRT1	Phosphorylation	S27	0.351	-0.363	_EAASS(ph)PAGEPLR_
SIRT1	Phosphorylation	S47	-0.574	-0.607	_S(ph)PGEPGGAAPER_
SIRT1	Ubiquitylation	K238	-1.641		_RK(gl)DINTIEDAVK_
SIRT1	Ubiquitylation	K499	-2.138	-0.204	_LGGEYAK(gl)LCCNPVK_
SIRT1	Ubiquitylation	K578	-2.782		_GCMEEK(gl)PQEVQTSR_
SIRT1	Ubiquitylation	K601	-3.051		_NVESIAEQMENPDLK(gl)NVGSSTGEK_
SMARCA4	Ubiquitylation	K357	-0.934		_ITPIQK(gl)PR_
SMARCA4	Ubiquitylation	K405	0.109	1.148	_ATIELK(gl)ALR_
SMARCA4	Ubiquitylation	K437	-0.317		_DTALETALNAK(gl)AYKR_
SMARCA4	Ubiquitylation	K455	0.225		_ITEK(gl)LEK_
SMARCA4	Ubiquitylation	K496		0.923	_SVTGK(gl)IQK_
SMARCA4	Phosphorylation	S677	-0.880	-0.324	_KAENAEGQTPAIGPDGEPLDETSQMS(ph)DLPVK_
SMARCA4	Ubiquitylation	K1283	0.125		_ILAAAK(gl)YK_
SMARCA4	Phosphorylation	S1413	-0.265	0.515	_EVDYSDS(ph)LTEK_
SMARCA4	Phosphorylation	S1486	-0.713	-0.935	_LS(ph)PNPPNLTK_