Results for the Category
Y-form DNA binding
(GO:0000403)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| RAD18 | 2 | 0.290 | -0.170 | |||||
| RAD18 | 2 | 0.290 | -0.170 | 0.133 | -0.034 | 0.651 | ||
| RAD18 | 2 | 0.290 | -0.170 | -0.119 | ||||
| MSH2 | 1 | -0.130 | 0.010 | 0.224 | 0.457 | 0.838 | 0.840 | 0.366 |
| MSH3 | 0 | 0.890 | -0.360 | -0.771 | 0.719 | 0.629 | 0.421 | 0.240 |
| MEN1 | 0 | 1.080 | -1.150 | 0.101 | 0.684 | -0.063 | ||
| MEN1 | 0 | 1.080 | -1.150 | 0.395 | ||||
| MEN1 | 0 | 1.080 | -1.150 | |||||
| WRN | 0 | -0.320 | -0.170 | 0.180 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| MEN1 | Ubiquitylation | K8 | -1.132 | 0.088 | _AAQK(gl)TLFPLR_ |
| MEN1 | Phosphorylation | S218 | -0.820 | _RES(ph)KPEEPPPPK_ | |
| MSH2 | Ubiquitylation | K212 | -0.233 | _ECVLPGGETAGDMGK(gl)LR_ | |
| MSH2 | Ubiquitylation | K249 | 0.461 | _K(gl)GEQMNSAVLPEMENQVAVSSLSAVIK_ | |
| MSH2 | Ubiquitylation | K347 | 2.867 | _LVNQWIK(gl)QPLMDK_ | |
| MSH2 | Ubiquitylation | K531 | 1.040 | _VTCKEEK(gl)VLR_ | |
| MSH2 | Ubiquitylation | K555 | 0.164 | _FTNSK(gl)LTSLNEEYTK_ | |
| MSH2 | Ubiquitylation | K635 | -0.376 | _IILK(gl)ASR_ | |
| RAD18 | Ubiquitylation | K13 | 0.971 | -0.795 | _TVTITK(gl)EDESTEK_ |
| RAD18 | Ubiquitylation | K73 | -1.744 | _TQCPTCCVTVTEPDLK(gl)NNR_ | |
| RAD18 | Phosphorylation | S99 | -0.633 | 0.106 | _NHLLQFALES(ph)PAK_ |
| RAD18 | Phosphorylation | S103 | 1.453 | 1.119 | _NHLLQFALESPAKS(ph)PASSSSK_ |
| RAD18 | Ubiquitylation | K110 | -0.405 | -0.669 | _SPASSSSK(gl)NLAVK_ |
| RAD18 | Ubiquitylation | K110 | -0.405 | -0.669 | _SPASSSSK(gl)NLAVK_ |
| RAD18 | Ubiquitylation | K115 | -0.231 | -0.368 | _NLAVK(gl)VYTPVASR_ |
| RAD18 | Ubiquitylation | K151 | 0.809 | 0.351 | _EMSGSTSELLIK(gl)ENK_ |
| RAD18 | Ubiquitylation | K154 | 0.097 | 0.713 | _EMSGSTSELLIKENK(gl)SK_ |
| RAD18 | Ubiquitylation | K156 | 0.757 | 0.161 | _SK(gl)FSPQK_ |
| RAD18 | Ubiquitylation | K161 | -0.335 | -0.403 | _FSPQK(gl)EASPAAK_ |
| RAD18 | Ubiquitylation | K186 | -1.903 | -2.009 | _SVEEIAPDPSEAK(gl)RPEPPSTSTLK_ |
| RAD18 | Ubiquitylation | K197 | -1.182 | _RPEPPSTSTLK(gl)QVTK_ | |
| RAD18 | Ubiquitylation | K258 | -0.742 | _TVYNLLSDRDLKK(gl)_ | |
| RAD18 | Ubiquitylation | K261 | 0.601 | 0.053 | _LK(gl)EHGLSIQGNK_ |
| RAD18 | Ubiquitylation | K309 | 0.251 | _SAAEIVQEIENIEK(gl)TR_ | |
| RAD18 | Ubiquitylation | K318 | 1.786 | _LEASK(gl)LNESVMVFTK_ | |
| RAD18 | Ubiquitylation | K333 | 0.989 | 1.516 | _DQTEK(gl)EIDEIHSK_ |
| RAD18 | Ubiquitylation | K370 | -0.695 | _IAGMSQK(gl)TVTITK_ | |
| RAD18 | Ubiquitylation | K376 | 0.971 | -0.795 | _TVTITK(gl)EDESTEK_ |
| RAD18 | Phosphorylation | S471 | 0.270 | 0.272 | _NDLQDTEIS(ph)PR_ |
| WRN | Ubiquitylation | K134 | 0.717 | _MLLENKAVK(gl)_ | |
| WRN | Phosphorylation | S1133 | 0.363 | 0.023 | _SIMVQS(ph)PEK_ |
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© Copyright Svejstrup Laboratory 2015