RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
HNRNPM	2	0.210	-0.550	-0.689	-1.927	-0.440	-0.803	-0.188
HNRNPA1	2	-1.640	2.570	0.075	-0.732	0.003
HNRNPA1	2	-1.290	1.410	0.075	-0.732	0.003
SFPQ	1	-1.880	4.270	0.328	0.568	-0.141	-0.140	0.032
MBNL1	1	1.270	-0.900					-5.302
PTBP1	0	-1.070	1.860	-0.617	-1.830	-1.113
CDK13	0	-0.100	0.210				-0.507	-0.248
SLU7	0	-1.400	2.470	-1.690			-1.547	-0.162
RSRC1	0	-1.040	1.350				-1.074	-0.045

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CDK13	Phosphorylation	S383	-0.073	0.010	_GGDVS(ph)PSPYSSSSWR_
CDK13	Phosphorylation	S493		-0.539	_ASNTS(ph)TPTKGNTETSASASQTNHVK_
CDK13	Phosphorylation	T494	-0.207		_ASNTST(ph)PTKGNTETSASASQTNHVK_
CDK13	Phosphorylation	S525	0.544	0.150	_IEHAPS(ph)PSSGGTLK_
CDK13	Phosphorylation	S664	-0.641		_CLLADLPLPPELPGGDDLSKS(ph)PEEK_
CDK13	Phosphorylation	T1246	-0.527	-0.133	_ILELT(ph)PEPDRPR_
HNRNPA1	Phosphorylation	S2	-0.533	-0.660	_(ac)S(ph)KSES(ph)PKEPEQLR_
HNRNPA1	Ubiquitylation	K3	-1.084	-0.893	_(ac)SK(gl)SESPKEPEQLR_
HNRNPA1	Phosphorylation	S4	0.422	-0.360	_S(ph)ESPKEPEQLRK_
HNRNPA1	Phosphorylation	S6	0.306	0.113	_(ac)S(ph)KSES(ph)PKEPEQLR_
HNRNPA1	Ubiquitylation	K8	-0.962		_SESPK(gl)EPEQLR_
HNRNPA1	Phosphorylation	S22		0.705	_LFIGGLS(ph)FETTDESLR_
HNRNPA1	Phosphorylation	S95		0.849	_EDS(ph)QRPGAHLTVK_
HNRNPA1	Ubiquitylation	K105	0.268	0.130	_EDSQRPGAHLTVK(gl)K_
HNRNPA1	Ubiquitylation	K106	0.268		_EDSQRPGAHLTVKK(gl)_
HNRNPA1	Ubiquitylation	K183	1.234		_ALSK(gl)QEMASASSSQR_
HNRNPA1	Phosphorylation	S337	-0.676	-0.603	_S(ph)SGPYGGGGQYFAK_
HNRNPA1	Phosphorylation	S338		-0.603	_S(ph)SGPYGGGGQYFAK_
HNRNPA1	Ubiquitylation	K350	-0.732	1.588	_SSGPYGGGGQYFAK(gl)PR_
HNRNPA1	Phosphorylation	S360	0.578		_NQGGYGGS(ph)SSSSSYGSGR_
HNRNPA1	Phosphorylation	S361	0.801		_NQGGYGGSS(ph)SSSSYGSGR_
HNRNPA1	Phosphorylation	S368	0.872	1.197	_NQGGYGGSSSSSSYGS(ph)GR_
HNRNPM	Ubiquitylation	K69	-0.327	-0.144	_GGNRFEPYANPTK(gl)R_
HNRNPM	Ubiquitylation	K88	0.540	0.868	_WQSLK(gl)DLVK_
HNRNPM	Ubiquitylation	K134	0.163		_AAEVLNK(gl)HSLSGRPLK_
HNRNPM	Ubiquitylation	K239	0.592		_ADILEDK(gl)DGK_
HNRNPM	Ubiquitylation	K242	-0.071	-0.112	_ADILEDKDGK(gl)SR_
HNRNPM	Ubiquitylation	K381	1.140	1.108	_INEILSNALK(gl)R_
HNRNPM	Ubiquitylation	K388	0.534	0.382	_RGEIIAK(gl)QGGGGGGGSVPGIER_
HNRNPM	Phosphorylation	S452	3.711		_MGS(ph)GIER_
HNRNPM	Phosphorylation	S528	1.314	0.912	_MGLS(ph)MER_
HNRNPM	Phosphorylation	S575	0.835	1.331	_MGANS(ph)LER_
HNRNPM	Phosphorylation	S618	1.486	0.753	_MGLAMGGGGGAS(ph)FDR_
HNRNPM	Ubiquitylation	K651	1.734	1.372	_K(gl)ACQIFVR_
HNRNPM	Ubiquitylation	K698	0.670	0.201	_GCGVVK(gl)FESPEVAER_
HNRNPM	Phosphorylation	S701	-0.135	-0.167	_FES(ph)PEVAER_
HNRNPM	Ubiquitylation	K716	0.926	0.990	_MMNGMK(gl)LSGR_
MBNL1	Ubiquitylation	K58		1.821	_VIACFDSLK(gl)GR_
PTBP1	Ubiquitylation	K13	-0.461	0.072	_(ac)MDGIVPDIAVGTK(gl)R_
PTBP1	Ubiquitylation	K92	0.474	0.219	_VTNLLMLK(gl)GK_
PTBP1	Ubiquitylation	K94	1.069	0.999	_VTNLLMLKGK(gl)_
PTBP1	Ubiquitylation	K134	0.323		_GQPIYIQFSNHK(gl)ELK_
PTBP1	Ubiquitylation	K137	-0.157	-0.233	_ELK(gl)TDSSPNQAR_
PTBP1	Phosphorylation	T138	0.390		_ELKT(ph)DSSPNQAR_
PTBP1	Phosphorylation	S140	0.879		_ELKTDS(ph)SPNQAR_
PTBP1	Phosphorylation	S141	0.446	0.650	_ELKTDSS(ph)PNQAR_
PTBP1	Ubiquitylation	K259	0.361		_IDFSK(gl)LTSLNVK_
PTBP1	Ubiquitylation	K266	0.803	-0.412	_LTSLNVK(gl)YNNDK_
PTBP1	Ubiquitylation	K410	0.833		_ITLSK(gl)HQNVQLPR_
PTBP1	Ubiquitylation	K428	0.281		_EGQEDQGLTK(gl)DYGNSPLHR_
PTBP1	Ubiquitylation	K482	1.293	1.265	_VLFSSNGGVVK(gl)GFK_
PTBP1	Ubiquitylation	K489	0.598		_FFQK(gl)DRK_
PTBP1	Ubiquitylation	K528	0.710		_VSFSK(gl)STI_
SFPQ	Ubiquitylation	K271	0.191		_SEEK(gl)ISDSEGFK_
SFPQ	Phosphorylation	S273	0.863	0.625	_SEEKIS(ph)DSEGFK_
SFPQ	Ubiquitylation	K291	0.067		_RPGEK(gl)TYTQR_
SFPQ	Ubiquitylation	K330	0.013		_YGEPGEVFINK(gl)GK_
SFPQ	Ubiquitylation	K332	1.002	1.454	_GK(gl)GFGFIK_
SFPQ	Ubiquitylation	K338	0.958		_GFGFIK(gl)LESR_
SFPQ	Ubiquitylation	K413	0.957	0.529	_STGK(gl)GIVEFASKPAAR_
SFPQ	Ubiquitylation	K421	0.383	1.058	_GIVEFASK(gl)PAAR_
SFPQ	Ubiquitylation	K466	-0.093	1.182	_LAQK(gl)NPMYQK_
SFPQ	Ubiquitylation	K559	-0.148	0.186	_MEELHNQEMQK(gl)R_
SFPQ	Phosphorylation	T687		-1.833	_GMGPGT(ph)PAGYGR_
SLU7	Phosphorylation	S215	0.358		_LVEQANS(ph)PK_