bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Category

Results for the Category
Postsplicing complex
(814)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
UPF1 0 -0.362 -0.954 -0.781 -0.966 -0.333
UPF3B 0 -0.820 0.890 -0.652 -0.447
UPF2 0 0.020 -0.140 -0.668 -0.131
NXF1 0 -0.262 0.366 0.002
RNPS1 0 -1.050 1.360 0.820 1.396 0.628 -0.117 0.102
RNPS1 0 -0.890 1.750 0.820 1.396 0.628 -0.117 0.102

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
NXF1 Ubiquitylation K173 0.298 _AQFFVEDASTASALK(gl)AVNYK_
NXF1 Ubiquitylation K607 0.028 _SAQAFTHLK(gl)AK_
RNPS1 Ubiquitylation K8 -0.465 _(ac)MDLSGVKK(gl)_
RNPS1 Phosphorylation S251 0.028 _RFS(ph)PPRR_
UPF1 Ubiquitylation K321 0.611 _LK(gl)ESQTQDNITVR_
UPF1 Ubiquitylation K340 -1.693 _WDLGLNKK(gl)_
UPF1 Ubiquitylation K378 -1.658 _YK(gl)GDLAPLWK_
UPF1 Ubiquitylation K638 -2.024 -0.456 _LAK(gl)MQFR_
UPF1 Ubiquitylation K790 0.647 0.880 _ITTK(gl)LLK_
UPF1 Ubiquitylation K793 -2.075 _LLK(gl)AGAKPDQIGIITPYEGQR_
UPF1 Phosphorylation S1107 0.100 0.763 _SQIDVALS(ph)QDSTYQGER_
UPF3B Ubiquitylation K196 0.208 _K(gl)TTPLLSFLK_


© Copyright Svejstrup Laboratory 2015