RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
HSPA8	2	-0.640	0.320	0.616	0.207	0.569	0.697	0.187
PDIA3	2	-2.160	3.830	0.411	2.714	-0.864	0.952	0.794
PDIA3	2	-2.160	3.830	0.189	2.142	-1.800
HMGB1	2	-1.590	3.400		2.856	-1.899	0.030	-0.792
GAPDH	0	0.130	0.380	0.283	0.870	0.760	-0.040	-0.473
HMGB2	0	-0.350	0.170			-1.810	0.655	0.285

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
GAPDH	Ubiquitylation	K61	0.521	0.820	_FHGTVK(gl)AENGK_
GAPDH	Ubiquitylation	K66	-0.023		_FHGTVKAENGK(gl)_
GAPDH	Ubiquitylation	K86	0.473		_IK(gl)WGDAGAEYVVESTGVFTTMEK_
GAPDH	Ubiquitylation	K117	1.371		_AGAHLQGGAK(gl)R_
GAPDH	Ubiquitylation	K145	0.536	0.707	_YDNSLK(gl)IISNASCTTNCLAPLAK_
GAPDH	Ubiquitylation	K194	0.139	0.426	_TVDGPSGK(gl)LWR_
GAPDH	Ubiquitylation	K215	0.068	0.425	_GALQNIIPASTGAAK(gl)AVGK_
GAPDH	Ubiquitylation	K219		0.588	_GALQNIIPASTGAAKAVGK(gl)_
GAPDH	Ubiquitylation	K254	-0.005		_LEKPAK(gl)YDDIKK_
GAPDH	Ubiquitylation	K259	-0.052	0.054	_LEKPAKYDDIK(gl)K_
GAPDH	Ubiquitylation	K260	0.061	-0.269	_LEKPAKYDDIKK(gl)_
GAPDH	Ubiquitylation	K263	-0.140	0.790	_VVK(gl)QASEGPLK_
HMGB1	Ubiquitylation	K50	0.651		_WK(gl)TMSAK_
HMGB1	Ubiquitylation	K59	1.001	0.009	_GK(gl)FEDMAK_
HMGB1	Ubiquitylation	K114		0.314	_IK(gl)GEHPGLSIGDVAK_
HMGB1	Ubiquitylation	K127	0.018		_IKGEHPGLSIGDVAK(gl)K_
HMGB1	Ubiquitylation	K128	-0.407		_K(gl)LGEMWNNTAADDKQPYEK_
HMGB1	Ubiquitylation	K157	0.850		_YEK(gl)DIAAYR_
HMGB2	Ubiquitylation	K114	0.323		_IK(gl)SEHPGLSIGDTAK_
HMGB2	Ubiquitylation	K128	0.363		_K(gl)LGEMWSEQSAK_
HMGB2	Ubiquitylation	K147	0.205	-0.408	_DKQPYEQK(gl)AAK_
HMGB2	Ubiquitylation	K150	-0.251		_DKQPYEQKAAK(gl)_
HSPA8	Ubiquitylation	K3	-0.324		_(ac)SK(gl)GPAVGIDLGTTYSCVGVFQHGK_
HSPA8	Ubiquitylation	K56	-0.260	1.224	_LIGDAAK(gl)NQVAMNPTNTVFDAK(gl)R_
HSPA8	Ubiquitylation	K71	0.041	1.713	_NQVAM(ox)NPTNTVFDAK(gl)R_
HSPA8	Ubiquitylation	K108	0.301	0.877	_VQVEYK(gl)GETK_
HSPA8	Ubiquitylation	K126	-0.071	0.472	_SFYPEEVSSMVLTK(gl)MK_
HSPA8	Ubiquitylation	K128	1.160	0.420	_MK(gl)EIAEAYLGK_
HSPA8	Ubiquitylation	K159	0.192	2.025	_QATK(gl)DAGTIAGLNVLR_
HSPA8	Ubiquitylation	K187		0.744	_IINEPTAAAIAYGLDK(gl)K_
HSPA8	Ubiquitylation	K188	-0.076	0.744	_IINEPTAAAIAYGLDKK(gl)_
HSPA8	Ubiquitylation	K319	0.026	-0.313	_GTLDPVEK(gl)ALR_
HSPA8	Ubiquitylation	K325	0.501	-0.341	_ALRDAK(gl)LDK_
HSPA8	Ubiquitylation	K328	-0.057	0.670	_LDK(gl)SQIHDIVLVGGSTR_
HSPA8	Ubiquitylation	K348	0.390	3.929	_IQK(gl)LLQDFFNGK_
HSPA8	Ubiquitylation	K357	0.339		_LLQDFFNGK(gl)ELNK_
HSPA8	Ubiquitylation	K451	0.095	0.846	_AMTK(gl)DNNLLGK_
HSPA8	Ubiquitylation	K497	0.354	0.667	_STGK(gl)ENKITITNDK_
HSPA8	Ubiquitylation	K500	0.066	1.038	_ENK(gl)ITITNDK_
HSPA8	Ubiquitylation	K507	-0.228	-0.104	_ITITNDK(gl)GR_
HSPA8	Ubiquitylation	K512	0.321	0.692	_LSK(gl)EDIER_
HSPA8	Ubiquitylation	K524	0.032	-0.180	_M(ox)VQEAEK(gl)YKAEDEKQR_
HSPA8	Ubiquitylation	K526	4.133	0.230	_MVQEAEKYK(gl)AEDEK_
HSPA8	Ubiquitylation	K531	1.093		_MVQEAEK(gl)YKAEDEK(gl)QR_
HSPA8	Ubiquitylation	K539	-0.121	0.409	_VSSK(gl)NSLESYAFNMK_
HSPA8	Ubiquitylation	K557		-0.270	_ATVEDEK(gl)LQGK_
HSPA8	Ubiquitylation	K597	0.282		_NQTAEKEEFEHQQK(gl)ELEK_
HSPA8	Ubiquitylation	K601	0.005	0.196	_ELEK(gl)VCNPIITK_
PDIA3	Ubiquitylation	K75		-0.105	_LK(gl)GIVPLAK_
PDIA3	Ubiquitylation	K94	-0.012	0.658	_VDCTANTNTCNK(gl)YGVSGYPTLK_
PDIA3	Ubiquitylation	K130		0.775	_TADGIVSHLKK(gl)_
PDIA3	Ubiquitylation	K226	-0.163	0.525	_TVAYTEQK(gl)MTSGK_
PDIA3	Ubiquitylation	K362	-0.242		_FLQDYFDGNLK(gl)R_