bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Category

Results for the Category
12S U11 snRNP
(1068)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
YBX1 2 -0.180 -0.010 -0.197 -0.190 -1.344 -0.617
SRSF7 2 -0.690 0.700 -0.134 -0.453 -0.090 0.040 -0.277
SNRPD2 1 -1.740 2.880 0.068 -0.598 0.211 0.010 0.140
TOE1 1 2.440 -1.080 -0.038 -0.115 0.854 -0.555 0.285
SNRPD3 0 -0.044 -0.427 0.192
SNRPB 0 -0.690 0.900 0.279 -0.218 0.342 0.246 0.550
SNRPF 0 -0.086 -0.877 -0.179 -0.438 0.348
SNRPG 0 -0.190 -0.311 0.245 0.156 0.568
SNRPG 0
SNRPD1 0 -0.780 0.750 0.034 -0.359 0.355 -1.109 -0.252
SNRNP48 0 -0.420 0.230
SNRPE 0 -1.140 2.270 -0.259 -0.638 -0.181 0.064 -0.174

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
SNRNP48 Ubiquitylation K120 -1.033 _DSQFQIIK(gl)QAR_
SNRPB Ubiquitylation K8 0.805 _SSK(gl)MLQHIDYR_
SNRPB Ubiquitylation K32 0.987 _IFIGTFK(gl)_
SNRPB Ubiquitylation K88 -0.870 _GENLVSMTVEGPPPK(gl)DTGIAR_
SNRPD1 Ubiquitylation K44 0.032 _AVK(gl)MTLK_
SNRPD2 Phosphorylation S2 -0.117 0.507 _(ac)S(ph)LLNKPK_
SNRPD2 Ubiquitylation K6 -0.352 _(ac)SLLNK(gl)PK_
SNRPD2 Ubiquitylation K8 -0.201 -0.603 _(ac)SLLNKPK(gl)SEMTPEELQK_
SNRPD2 Phosphorylation T12 0.766 _SEMT(ph)PEELQKR_
SNRPD2 Ubiquitylation K98 0.883 0.887 _YISK(gl)MFLR_
SNRPD2 Ubiquitylation K118 -0.918 -0.587 _NPLIAGK(gl)_
SNRPD3 Ubiquitylation K78 0.797 _FLILPDMLK(gl)NAPMLK_
SNRPD3 Ubiquitylation K84 -0.440 0.082 _NAPMLK(gl)SMK_
SNRPF Ubiquitylation K8 -1.763 _(ac)SLPLNPK(gl)PFLNGLTGKPVMVK_
SNRPF Ubiquitylation K17 -1.612 _(ac)SLPLNPKPFLNGLTGK(gl)PVMVK_
SNRPF Ubiquitylation K24 0.208 0.915 _LK(gl)WGMEYK_
SNRPG Ubiquitylation K3 0.152 _(ac)SK(gl)AHPPELKK(gl)_
SNRPG Ubiquitylation K11 -0.955 _AHPPELKK(gl)_
SNRPG Ubiquitylation K20 -0.065 _LSLK(gl)LNGGR_
SRSF7 Ubiquitylation K12 1.581 _YGGETK(gl)VYVGNLGTGAGK_
SRSF7 Ubiquitylation K24 0.588 0.481 _VYVGNLGTGAGK(gl)GELER_
SRSF7 Ubiquitylation K70 1.291 2.646 _GLDGK(gl)VICGSR_
SRSF7 Phosphorylation S192 0.600 0.679 _YFQS(ph)PSR_
TOE1 Phosphorylation S5 0.486 0.438 _AADS(ph)DDGAVSAPAASDGGVSK_
YBX1 Ubiquitylation K64 5.830 4.056 _VLGTVK(gl)WFNVR_
YBX1 Ubiquitylation K137 -0.751 0.084 _GAEAANVTGPGGVPVQGSK(gl)YAADR_
YBX1 Phosphorylation Y162 -0.210 _NYQQNY(ph)QNSESGEKNEGSESAPEGQAQQR_
YBX1 Phosphorylation S165 0.119 0.151 _NYQQNYQNS(ph)ESGEK_
YBX1 Ubiquitylation K170 -0.297 0.298 _NYQQNYQNSESGEK(gl)NEGSESAPEGQAQQR_
YBX1 Phosphorylation S174 0.041 0.228 _NEGS(ph)ESAPEGQAQQR_
YBX1 Phosphorylation S176 0.061 0.075 _NEGSES(ph)APEGQAQQR_
YBX1 Phosphorylation S209 0.658 -0.148 _RPQYS(ph)NPPVQGEVM(ox)EGADNQGAGEQGRPVR_


© Copyright Svejstrup Laboratory 2015