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Query: SNRNP48

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SNRNP48 0 -0.803 -0.420 0.230

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SNRNP48 Ubiquitylation K120 -1.033 _DSQFQIIK(gl)QAR_

Background Information for SNRNP48:





Protein-protein Interactions for SNRNP48

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait RAB11FIP1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SNRNP35 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNRPE Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNRPF Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNRPG Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNRPN Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZCRB1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZMAT5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZRSR2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SNRNP48

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members TRM13/UPF0224_CHHC_Znf_dom IPR022776 0


Protein complexes (CORUM database) featuring SNRNP48

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 430 18S U11/U12 snRNP Database 0.29
Category members Corum 1068 12S U11 snRNP Database 0.17


Categories featuring SNRNP48

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0008380 RNA splicing Database 10.77
Category members GO Category GO:0006397 mRNA processing Database 3.76
Category members GO Category GO:0005689 U12-type spliceosomal complex Database 0.29
Category members GO Category GO:0046872 metal ion binding Database 0


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