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Query: SSBP1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SSBP1 0 1.371 0.580 -0.460
SSBP1 0 1.371 0.580 -0.460 0.755 0.990 -0.115

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SSBP1 Ubiquitylation K103 0.616 _DVAYQYVK(gl)K_
SSBP1 Ubiquitylation K104 0.616 _DVAYQYVK(gl)K_

Background Information for SSBP1:


Pubmed-SSBP1 »
Uniprot-SSBP1 »
Biogrid-SSBP1 »
ProteomicsDB-SSBP1 »

Tumorportal-SSBP1 »
COSMIC-SSBP1 »
GenomeRNAi-SSBP1 »
Genecards-SSBP1


Protein-protein Interactions for SSBP1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CETN2 Cat. description Hein, Mann, Cell 2015


Protein Domains in SSBP1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members NA-bd_OB-fold IPR012340 4.37


Protein complexes (CORUM database) featuring SSBP1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SSBP1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0003682 chromatin binding Database 6.07
Category members GO Category GO:0003697 single-stranded DNA binding Database 4.24
Category members GO Category GO:0006260 DNA replication Database 3.34
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members Pathway Pathway_341 KEGG_MISMATCH_REPAIR 0 1.02
Category members Pathway Pathway_329 KEGG_DNA_REPLICATION 0 0.95
Category members GO Category GO:0051096 positive regulation of helicase activity Database 0.73
Category members GO Category GO:0042645 mitochondrial nucleoid Database 0.61
Category members Pathway Pathway_343 KEGG_HOMOLOGOUS_RECOMBINATION 0 0.12
Category members GO Category GO:0070584 mitochondrion morphogenesis Database 0


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