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Query: SNAPIN

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SNAPIN 1 6.531 -2.700 4.770

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SNAPIN Phosphorylation T14 0.785 0.681 _(ac)AGAGSAAVSGAGT(ph)PVAGPTGR_
SNAPIN Phosphorylation S133 -0.868 _AM(ox)LDSGIYPPGS(ph)PGK_
SNAPIN Ubiquitylation K136 0.295 _AMLDSGIYPPGSPGK(gl)_

Background Information for SNAPIN:


Pubmed-SNAPIN »
Uniprot-SNAPIN »
Biogrid-SNAPIN »
ProteomicsDB-SNAPIN »

Tumorportal-SNAPIN »
COSMIC-SNAPIN »
GenomeRNAi-SNAPIN »
Genecards-SNAPIN


Protein-protein Interactions for SNAPIN
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CEP170 Cat. description Hein, Mann, Cell 2015
Category members IP bait CEP170P1 Cat. description Hein, Mann, Cell 2015
Category members IP bait BCAS4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C17orf59 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C1orf49 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CCDC151 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CEP170 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait COG6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DTNBP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait EXOC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IKBIP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KLC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SCOC Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SYBU Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TCP10L Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMEM171 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRAK2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRIM69 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRIML2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TSKS Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SNAPIN
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring SNAPIN
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 23 BLOC-1 (biogenesis of lysosome-related organelles complex 1) Database 0
Category members Corum 652 AP3-BLOC1 complex Database 0
Category members Corum 654 BLOC1-BLOC2 complex Database 0


Categories featuring SNAPIN
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0005730 nucleolus Database 13.38
Category members GO Category GO:0019048 modulation by virus of host morphology or physiology Database 7.81
Category members GO Category GO:0006886 intracellular protein transport Database 2.48
Category members GO Category GO:0030672 synaptic vesicle membrane Database 1.16
Category members Pathway Pathway_474 REACTOME_MEMBRANE_TRAFFICKING 0 1.14
Category members Pathway Pathway_475 REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING 0 0.98
Category members Pathway Pathway_520 REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS 0 0.78
Category members GO Category GO:0048471 perinuclear region of cytoplasm Database 0.39
Category members GO Category GO:0008021 synaptic vesicle Database 0.28
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members GO Category GO:0007268 synaptic transmission Database 0.23
Category members GO Category GO:0031175 neuron projection development Database 0.12
Category members GO Category GO:0043005 neuron projection Database 0.08
Category members GO Category GO:0045202 synapse Database 0.06
Category members GO Category GO:0000149 SNARE binding Database 0.05
Category members GO Category GO:0000139 Golgi membrane Database 0
Category members GO Category GO:0007269 neurotransmitter secretion Database 0
Category members GO Category GO:0008089 anterograde axon cargo transport Database 0
Category members GO Category GO:0016079 synaptic vesicle exocytosis Database 0
Category members GO Category GO:0016188 synaptic vesicle maturation Database 0
Category members GO Category GO:0030054 cell junction Database 0
Category members GO Category GO:0031083 BLOC-1 complex Database 0
Category members GO Category GO:0032438 melanosome organization Database 0
Category members GO Category GO:0048490 anterograde synaptic vesicle transport Database 0


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