bioLOGIC-db

bioLOGIC Data

Query: SAP30

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
SAP30	0	0.075	-0.180	0.110		-0.538	0.864

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
SAP30	Ubiquitylation	K214	-0.201	-0.160	_SDLK(gl)VDSGVH_

ProteomicsDB-SAP30 »

Protein-protein Interactions for SAP30

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait CUL3	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait FAM60A	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait HDAC1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait MAX	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait SAP30	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait SIN3A	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait SIN3B	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait SMC1A	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait FAM60A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait HDAC1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait ING2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait MXD3	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait PHF23	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RBBP7	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait ZNF704	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in SAP30

	Domain name	Domain Description	TC-NER relevance -log10(p-value)

Protein complexes (CORUM database) featuring SAP30

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	Corum	1257	ALL-1 supercomplex	Database	4.3
Category members	Corum	739	SIN3-ING1b complex II	Database	4.24
Category members	Corum	2721	HCF-1 complex	Database	2.08
Category members	Corum	691	SIN3-SAP25 complex	Database	1.77
Category members	Corum	743	SIN3-SAP25 complex	Database	1.77
Category members	Corum	591	SAP complex (Sin3-associated protein complex)	Database	1.75
Category members	Corum	283	Sin3 complex	Database	1.47
Category members	Corum	54	SIN3 complex	Database	1.47
Category members	Corum	732	SIN3 complex	Database	1.47
Category members	Corum	738	SIN3-ING1b complex I	Database	1.47
Category members	Corum	596	SIN3-HDAC-SAP30-ARID4 complex	Database	1.42
Category members	Corum	695	SIN3-HDAC-SAP30-ARID4 complex	Database	1.42
Category members	Corum	698	SIN3-HDAC-SAP30-ARID4 complex	Database	1.42
Category members	Corum	592	SAP complex (Sin3-associated protein complex)	Database	1.33
Category members	Corum	2851	ING2 complex	Database	0.74
Category members	Corum	696	BRMS1-SIN3-HDAC complex	Database	0.66
Category members	Corum	1505	NCOR2 complex	Database	0.15

Categories featuring SAP30

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0005634	nucleus	Database	INF
Category members	Pathway	Pathway_881	PID_TELOMERASE_PATHWAY	0	2.64
Category members	GO Category	GO:0003677	DNA binding	Database	1.53
Category members	Pathway	Pathway_943	PID_HDAC_CLASSI_PATHWAY	0	1.08
Category members	GO Category	GO:0006351	transcription, DNA-templated	Database	1.07
Category members	Pathway	Pathway_845	PID_SMAD2_3NUCLEAR_PATHWAY	0	0.46
Category members	Pathway	Pathway_984	PID_HEDGEHOG_GLI_PATHWAY	0	0.1
Category members	GO Category	GO:0000122	negative regulation of transcription from RNA polymerase II promoter	Database	0.02
Category members	GO Category	GO:0000118	histone deacetylase complex	Database	0
Category members	GO Category	GO:0003714	transcription corepressor activity	Database	0
Category members	GO Category	GO:0006355	regulation of transcription, DNA-dependent	Database	0
Category members	GO Category	GO:0035914	skeletal muscle cell differentiation	Database	0
Category members	GO Category	GO:0046872	metal ion binding	Database	0