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Query: PTPN13

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PTPN13 0 2.449 0.510 -0.610 0.549 0.504

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PTPN13 Phosphorylation S2107 0.703 _TEDTDCDGS(ph)PLPEYFTEATK_
PTPN13 Phosphorylation S1033 0.266 0.445 _SVASLNRS(ph)PERR_
PTPN13 Phosphorylation S1629 0.646 0.399 _DSSQPSCVEQSTS(ph)SDENEMSDK_
PTPN13 Phosphorylation S1029 0.693 0.332 _SVAS(ph)LNRSPER_
PTPN13 Phosphorylation S936 0.498 0.321 _RLS(ph)CSELSLYQPLQNSSK_
PTPN13 Phosphorylation S908 0.526 0.303 _AIS(ph)TGSLASSTLNK_
PTPN13 Phosphorylation S1630 0.306 0.272 _DSSQPSCVEQSTSS(ph)DENEM(ox)SDK_
PTPN13 Phosphorylation S345 0.424 0.250 _YS(ph)DGSIALDIFGPQK_
PTPN13 Phosphorylation S938 0.489 0.032 _LSCS(ph)ELSLYQPLQNSSK_
PTPN13 Phosphorylation S890 0.482 -0.006 _S(ph)LNLQAESVR_
PTPN13 Phosphorylation S1359 -0.207 -0.067 _TFSSS(ph)PPKPGDIFEVELAK_
PTPN13 Phosphorylation S1358 -0.423 -0.259 _TFSS(ph)SPPKPGDIFEVELAK_
PTPN13 Phosphorylation S2032 -0.758 -0.522 _GS(ph)PNLTLPK_

Background Information for PTPN13:


Pubmed-PTPN13 »
Uniprot-PTPN13 »
Biogrid-PTPN13 »
ProteomicsDB-PTPN13 »

Tumorportal-PTPN13 »
COSMIC-PTPN13 »
GenomeRNAi-PTPN13 »
Genecards-PTPN13


Protein-protein Interactions for PTPN13
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait PTPN13 Cat. description Hein, Mann, Cell 2015
Category members IP bait UFL1 Cat. description Hein, Mann, Cell 2015
Category members IP bait DFFB Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RGS2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PTPN13
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ubiquitin-rel_dom IPR029071 1.79
Category members FERM_N IPR018979 0.36
Category members FERM_PH-like_C IPR018980 0.35
Category members Band_41_fam IPR019750 0.33
Category members PDZ IPR001478 0.15
Category members PAZ_dom IPR003100 0.15
Category members KIND IPR011019 0.13
Category members Tyr_Pase_rcpt/non-rcpt IPR000242 0
Category members FERM_domain IPR000299 0
Category members Tyr/Dual-sp_Pase IPR000387 0
Category members Tyr_Pase_cat IPR003595 0
Category members FERM_central IPR019748 0
Category members Band_41_domain IPR019749 0
Category members Prot-tyrosine_phosphatase-like IPR029021 0


Protein complexes (CORUM database) featuring PTPN13
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PTPN13
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0030027 lamellipodium Database 1.77
Category members Pathway Pathway_962 BIOCARTA_FAS_PATHWAY 0 1.75
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0005856 cytoskeleton Database 0.63
Category members GO Category GO:0043005 neuron projection Database 0.08
Category members Pathway Pathway_386 ST_FAS_SIGNALING_PATHWAY 0 0.02
Category members Pathway Pathway_500 PID_FCER1_PATHWAY 0 0
Category members Pathway Pathway_547 PID_EPHRINB_REV_PATHWAY 0 0
Category members GO Category GO:0004725 protein tyrosine phosphatase activity Database 0
Category members GO Category GO:0006470 protein dephosphorylation Database 0
Category members GO Category GO:0016311 dephosphorylation Database 0
Category members GO Category GO:0016791 phosphatase activity Database 0
Category members GO Category GO:0035335 peptidyl-tyrosine dephosphorylation Database 0
Category members GO Category GO:0044297 cell body Database 0


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