bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: MYF6

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
MYF6 0 -0.453 -0.145 -0.308

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for MYF6:


Pubmed-MYF6 »
Uniprot-MYF6 »
Biogrid-MYF6 »
ProteomicsDB-MYF6 »

Tumorportal-MYF6 »
COSMIC-MYF6 »
GenomeRNAi-MYF6 »
Genecards-MYF6


Protein-protein Interactions for MYF6
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait MYF6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in MYF6
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members bHLH_dom IPR011598 0.32


Protein complexes (CORUM database) featuring MYF6
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring MYF6
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0045892 negative regulation of transcription, DNA-dependent Database 1.15
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members Pathway Pathway_42 REACTOME_DEVELOPMENTAL_BIOLOGY 0 0.32
Category members GO Category GO:0045893 positive regulation of transcription, DNA-dependent Database 0.28
Category members GO Category GO:0046982 protein heterodimerization activity Database 0.28
Category members Pathway Pathway_210 PID_CMYB_PATHWAY 0 0.2
Category members GO Category GO:0006357 regulation of transcription from RNA polymerase II promoter Database 0.19
Category members GO Category GO:0045944 positive regulation of transcription from RNA polymerase II promoter Database 0.13
Category members GO Category GO:0042692 muscle cell differentiation Database 0.1
Category members GO Category GO:0051149 positive regulation of muscle cell differentiation Database 0.04
Category members Pathway Pathway_1038 REACTOME_MYOGENESIS 0 0
Category members Disease phenotype Autosomal_dominant_centronuclear_myopathy Autosomal dominant centronuclear myopathy Database 0
Category members GO Category GO:0001756 somitogenesis Database 0
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0007517 muscle organ development Database 0
Category members GO Category GO:0007519 skeletal muscle tissue development Database 0
Category members GO Category GO:0035914 skeletal muscle cell differentiation Database 0
Category members GO Category GO:0042693 muscle cell fate commitment Database 0
Category members GO Category GO:0043403 skeletal muscle tissue regeneration Database 0
Category members GO Category GO:0046983 protein dimerization activity Database 0
Category members GO Category GO:0060415 muscle tissue morphogenesis Database 0
Category members GO Category GO:0070888 E-box binding Database 0


.

© Copyright Svejstrup Laboratory 2015