bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: MDFIC

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
MDFIC 1 3.938 -0.190 -0.070

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
MDFIC Phosphorylation T15 3.004 _PQRVAEAGGGQLGS(ph)T(ph)AQGK_
MDFIC Ubiquitylation K130 -0.043 0.429 _LSAPVSQK(gl)MHR_
MDFIC Ubiquitylation K95 0.575 -0.592 _LPQLQTSAQVPSGEEIGK(gl)IK_
MDFIC Ubiquitylation K97 0.102 _LPQLQTSAQVPSGEEIGKIK(gl)_

Background Information for MDFIC:





Protein-protein Interactions for MDFIC

Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in MDFIC

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members H/ACA_rnp_Nop10 IPR007264 0


Protein complexes (CORUM database) featuring MDFIC

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring MDFIC

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005730 nucleolus Database 13.38
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0019048 modulation by virus of host morphology or physiology Database 7.81
Category members GO Category GO:0050434 positive regulation of viral transcription Database 4.8
Category members GO Category GO:0045892 negative regulation of transcription, DNA-dependent Database 1.15
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0030957 Tat protein binding Database 0.73
Category members Pathway Pathway_199 PID_BETA_CATENIN_NUC_PATHWAY 0 0.53
Category members GO Category GO:0008134 transcription factor binding Database 0.37
Category members GO Category GO:0042254 ribosome biogenesis Database 0.29
Category members GO Category GO:0045893 positive regulation of transcription, DNA-dependent Database 0.28
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members GO Category GO:0007257 activation of JUN kinase activity Database 0.08
Category members GO Category GO:0030111 regulation of Wnt signaling pathway Database 0.08
Category members GO Category GO:0030515 snoRNA binding Database 0.07
Category members GO Category GO:0001522 pseudouridine synthesis Database 0
Category members GO Category GO:0030332 cyclin binding Database 0
Category members GO Category GO:0042308 negative regulation of protein import into nucleus Database 0


© Copyright Svejstrup Laboratory 2015