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Query: HMGN5

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
HMGN5 0 -2.266 0.120 -0.720 -1.319 -0.947

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for HMGN5:


Pubmed-HMGN5 »
Uniprot-HMGN5 »
Biogrid-HMGN5 »
ProteomicsDB-HMGN5 »

Tumorportal-HMGN5 »
COSMIC-HMGN5 »
GenomeRNAi-HMGN5 »
Genecards-HMGN5


Protein-protein Interactions for HMGN5
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait GTF2E2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNRNP27 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait USP47 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in HMGN5
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members HMGN_fam IPR000079 0.16


Protein complexes (CORUM database) featuring HMGN5
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring HMGN5
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members GO Category GO:0005730 nucleolus Database 13.38
Category members GO Category GO:0003682 chromatin binding Database 6.07
Category members GO Category GO:0000785 chromatin Database 2.59
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0043231 intracellular membrane-bounded organelle Database 0.43
Category members GO Category GO:0045893 positive regulation of transcription, DNA-dependent Database 0.28
Category members GO Category GO:0006357 regulation of transcription from RNA polymerase II promoter Database 0.19
Category members GO Category GO:0016568 chromatin modification Database 0.18
Category members GO Category GO:0031492 nucleosomal DNA binding Database 0.01
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0


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