Results for the Category
nucleosomal DNA binding
(GO:0031492)
RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
W | |||||||
Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
---|---|---|---|---|---|---|---|---|
HMGN1 | 2 | -0.050 | 0.130 | |||||
HMGN1 | 2 | -0.050 | 0.130 | |||||
HMGN3 | 1 | 0.310 | -0.590 | -1.537 | -1.454 | |||
HMGN4 | 1 | 0.590 | -0.830 | |||||
HMGN2 | 1 | 0.150 | 0.730 | |||||
HMGN2 | 1 | 0.150 | 0.730 | -1.537 | -1.454 | |||
HMGA2 | 0 | 0.340 | -0.490 | |||||
RCC1 | 0 | -0.180 | 0.240 | -0.398 | 0.623 | -0.380 | 0.480 | 0.104 |
HMGN5 | 0 | 0.120 | -0.720 | -1.319 | -0.947 |
Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
---|---|---|---|---|---|
HMGA2 | Phosphorylation | S44 | -0.564 | -0.762 | _KQQQEPTGEPS(ph)PK_ |
HMGA2 | Phosphorylation | S105 | -0.055 | -0.046 | _KPAQEETEETSSQES(ph)AEED_ |
HMGN1 | Phosphorylation | S7 | 1.696 | 0.085 | _KVS(ph)SAEGAAKEEPK_ |
HMGN1 | Phosphorylation | S8 | 0.243 | 0.475 | _VSS(ph)AEGAAKEEPK_ |
HMGN1 | Ubiquitylation | K30 | 1.557 | _VSSAEGAAK(gl)EEPK_ | |
HMGN1 | Phosphorylation | S86 | 0.276 | 0.310 | _TEES(ph)PASDEAGEKEAK_ |
HMGN1 | Phosphorylation | S89 | 0.009 | _TEESPAS(ph)DEAGEKEAK_ | |
HMGN1 | Phosphorylation | S99 | 0.293 | 0.342 | _TEESPASDEAGEKEAKS(ph)D_ |
HMGN2 | Phosphorylation | T10 | -0.157 | _RKSPENT(ph)EGK_ | |
HMGN2 | Ubiquitylation | K31 | -1.653 | _LSAK(gl)PAPPKPEPKPK_ | |
HMGN2 | Phosphorylation | S31 | -1.777 | -1.714 | _LS(ph)AKPAPPKPEPK_ |
HMGN2 | Ubiquitylation | K33 | -1.736 | _LSAK(gl)PAPPKPEPKPR_ | |
HMGN2 | Ubiquitylation | K36 | -1.444 | _LSAKPAPPK(gl)PEPKPK_ | |
HMGN2 | Ubiquitylation | K76 | 0.560 | 1.312 | _EGNNPAENGDAK(gl)TDQAQK_ |
HMGN2 | Phosphorylation | S78 | 3.475 | _EGTAPS(ph)ENGETKAEEAQK_ | |
HMGN2 | Phosphorylation | S93 | 0.325 | 0.602 | _AEEAQKTES(ph)VDNEGE_ |
HMGN3 | Phosphorylation | T10 | -0.157 | _RKSPENT(ph)EGK_ | |
HMGN3 | Phosphorylation | S31 | -1.777 | -1.714 | _LS(ph)AKPAPPKPEPK_ |
HMGN3 | Ubiquitylation | K33 | -1.736 | _LSAK(gl)PAPPKPEPKPR_ | |
HMGN3 | Phosphorylation | S78 | 3.475 | _EGTAPS(ph)ENGETKAEEAQK_ | |
HMGN3 | Phosphorylation | S93 | 0.325 | 0.602 | _AEEAQKTES(ph)VDNEGE_ |
HMGN4 | Phosphorylation | S80 | 0.406 | 2.072 | _DASTLQS(ph)QKAEGTGDAK_ |
RCC1 | Phosphorylation | S11 | -0.620 | -0.233 | _S(ph)PPADAIPK_ |
RCC1 | Ubiquitylation | K232 | 0.594 | 0.184 | _CVMLK(gl)SR_ |
RCC1 | Ubiquitylation | K335 | -0.717 | -0.175 | _LGLGEGAEEK(gl)SIPTLISR_ |
RCC1 | Ubiquitylation | K362 | 0.749 | 0.361 | _LPAVSSVACGASVGYAVTK(gl)DGR_ |
.
© Copyright Svejstrup Laboratory 2015