bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: ERI1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
ERI1 0 0.484 -0.350 0.290

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
ERI1 Ubiquitylation K92 0.194 _LSEFK(gl)LETR_

Background Information for ERI1:


Pubmed-ERI1 »
Uniprot-ERI1 »
Biogrid-ERI1 »
ProteomicsDB-ERI1 »

Tumorportal-ERI1 »
COSMIC-ERI1 »
GenomeRNAi-ERI1 »
Genecards-ERI1


Protein-protein Interactions for ERI1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CDC16 Cat. description Hein, Mann, Cell 2015
Category members IP bait CDCA5 Cat. description Hein, Mann, Cell 2015
Category members IP bait CEP170P1 Cat. description Hein, Mann, Cell 2015
Category members IP bait CEP78 Cat. description Hein, Mann, Cell 2015
Category members IP bait EIF3A Cat. description Hein, Mann, Cell 2015
Category members IP bait EIF3E Cat. description Hein, Mann, Cell 2015
Category members IP bait NAA50 Cat. description Hein, Mann, Cell 2015
Category members IP bait PPP2CA Cat. description Hein, Mann, Cell 2015
Category members IP bait SYN1 Cat. description Hein, Mann, Cell 2015
Category members IP bait TOPBP1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MAGEA10 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in ERI1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members SAP_dom IPR003034 1.96
Category members Exonuclease IPR006055 0
Category members RNaseH-like_dom IPR012337 0
Category members Exonuclease_RNaseT/DNA_pol3 IPR013520 0


Protein complexes (CORUM database) featuring ERI1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring ERI1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005730 nucleolus Database 13.38
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0019843 rRNA binding Database 0.46
Category members GO Category GO:0043022 ribosome binding Database 0.33
Category members GO Category GO:0004527 exonuclease activity Database 0
Category members GO Category GO:0008408 3'-5' exonuclease activity Database 0
Category members GO Category GO:0031047 gene silencing by RNA Database 0
Category members GO Category GO:0046872 metal ion binding Database 0
Category members GO Category GO:0071204 histone pre-mRNA 3'end processing complex Database 0
Category members GO Category GO:0071207 histone pre-mRNA stem-loop binding Database 0


.

© Copyright Svejstrup Laboratory 2015