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Query: COPZ1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
COPZ1 0 0.369 0.462 -0.105 -0.741

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
COPZ1 Ubiquitylation K42 -1.066 1.228 _YYDDTYPSVKEQK(gl)_
COPZ1 Ubiquitylation K46 -1.607 0.461 _AFEK(gl)NIFNK_
COPZ1 Ubiquitylation K39 -0.856 0.058 _YYDDTYPSVK(gl)EQK_
COPZ1 Ubiquitylation K193 -0.631 -0.012 _EQIK(gl)WSLLR_
COPZ1 Ubiquitylation K51 -0.475 -1.280 _NIFNK(gl)THR_

Background Information for COPZ1:


Pubmed-COPZ1 »
Uniprot-COPZ1 »
Biogrid-COPZ1 »
ProteomicsDB-COPZ1 »

Tumorportal-COPZ1 »
COSMIC-COPZ1 »
GenomeRNAi-COPZ1 »
Genecards-COPZ1


Protein-protein Interactions for COPZ1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait COPA Cat. description Hein, Mann, Cell 2015
Category members IP bait SACM1L Cat. description Hein, Mann, Cell 2015
Category members IP bait COPG Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in COPZ1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Longin-like_dom IPR011012 0.34
Category members AP_mu_sigma_su IPR022775 0.25


Protein complexes (CORUM database) featuring COPZ1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring COPZ1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005829 cytosol Database INF
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0006886 intracellular protein transport Database 2.48
Category members Pathway Pathway_474 REACTOME_MEMBRANE_TRAFFICKING 0 1.14
Category members GO Category GO:0016192 vesicle-mediated transport Database 1.1
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0006891 intra-Golgi vesicle-mediated transport Database 0.1
Category members GO Category GO:0006890 retrograde vesicle-mediated transport, Golgi to ER Database 0.05
Category members Pathway Pathway_1272 REACTOME_COPI_MEDIATED_TRANSPORT 0 0
Category members GO Category GO:0006810 transport Database 0
Category members GO Category GO:0030117 membrane coat Database 0
Category members GO Category GO:0030126 COPI vesicle coat Database 0
Category members GO Category GO:0048205 COPI coating of Golgi vesicle Database 0


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