bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: COBL

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
COBL 0 2.752 -1.440 1.820

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
COBL Phosphorylation S962 1.121 -0.189 _LS(ph)TQDRPAAIHR_

Background Information for COBL:


Pubmed-COBL »
Uniprot-COBL »
Biogrid-COBL »
ProteomicsDB-COBL »

Tumorportal-COBL »
COSMIC-COBL »
GenomeRNAi-COBL »
Genecards-COBL


Protein-protein Interactions for COBL
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ACTB Cat. description Hein, Mann, Cell 2015
Category members IP bait ACTR2 Cat. description Hein, Mann, Cell 2015
Category members IP bait ANLN Cat. description Hein, Mann, Cell 2015
Category members IP bait ARRB2 Cat. description Hein, Mann, Cell 2015
Category members IP bait CALML3 Cat. description Hein, Mann, Cell 2015
Category members IP bait CAPZA2 Cat. description Hein, Mann, Cell 2015
Category members IP bait CORO1C Cat. description Hein, Mann, Cell 2015
Category members IP bait DBN1 Cat. description Hein, Mann, Cell 2015
Category members IP bait EP300 Cat. description Hein, Mann, Cell 2015
Category members IP bait FLNA Cat. description Hein, Mann, Cell 2015
Category members IP bait FLNB Cat. description Hein, Mann, Cell 2015
Category members IP bait FLOT1 Cat. description Hein, Mann, Cell 2015
Category members IP bait FLOT2 Cat. description Hein, Mann, Cell 2015
Category members IP bait IQGAP1 Cat. description Hein, Mann, Cell 2015
Category members IP bait LIMA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MAPRE1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYH10 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYH9 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYO18A Cat. description Hein, Mann, Cell 2015
Category members IP bait MYO19 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYO1C Cat. description Hein, Mann, Cell 2015
Category members IP bait PDLIM7 Cat. description Hein, Mann, Cell 2015
Category members IP bait PPP1CB Cat. description Hein, Mann, Cell 2015
Category members IP bait SEPT9 Cat. description Hein, Mann, Cell 2015
Category members IP bait SYNPO Cat. description Hein, Mann, Cell 2015
Category members IP bait TMOD3 Cat. description Hein, Mann, Cell 2015
Category members IP bait TPM1 Cat. description Hein, Mann, Cell 2015
Category members IP bait COBL Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FHL3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PACSIN1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PACSIN2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PACSIN3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMOD3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in COBL
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ubiquitin-rel_dom IPR029071 1.79
Category members Cordon-bleu_ubiquitin_domain IPR019025 0.11
Category members WH2_dom IPR003124 0.04


Protein complexes (CORUM database) featuring COBL
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring COBL
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members DDR Literature pubmedid:24332808 Marechal et al., 2014 RPA-mediated recruitment INF
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0003779 actin binding Database 5.41
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0005938 cell cortex Database 2.26
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0001889 liver development Database 0.51
Category members GO Category GO:0048471 perinuclear region of cytoplasm Database 0.39
Category members GO Category GO:0001726 ruffle Database 0.33
Category members GO Category GO:0030425 dendrite Database 0.26
Category members GO Category GO:0030424 axon Database 0.23
Category members GO Category GO:0005884 actin filament Database 0.08
Category members GO Category GO:0030041 actin filament polymerization Database 0.01
Category members GO Category GO:0000578 embryonic axis specification Database 0
Category members GO Category GO:0001757 somite specification Database 0
Category members GO Category GO:0001843 neural tube closure Database 0
Category members GO Category GO:0003785 actin monomer binding Database 0
Category members GO Category GO:0030903 notochord development Database 0
Category members GO Category GO:0033504 floor plate development Database 0
Category members GO Category GO:0043025 neuronal cell body Database 0
Category members GO Category GO:0044294 dendritic growth cone Database 0
Category members GO Category GO:0044295 axonal growth cone Database 0
Category members GO Category GO:0048565 digestive tract development Database 0
Category members GO Category GO:0048669 collateral sprouting in absence of injury Database 0
Category members GO Category GO:0051639 actin filament network formation Database 0


.

© Copyright Svejstrup Laboratory 2015