RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
RALBP1	1	-1.890	3.240
RAF1	1	2.020	-1.230
MAP2K1	1	-1.590	2.780
BAD	0	-0.660	1.190
RALA	0	-0.480	0.600				0.727	0.398
RHOA	0	-0.510	1.370	-0.485			0.532	0.279
CDC42	0	-0.170	0.490	-0.597			-1.527	-1.013
CDC42	0	1.240	-0.940	-0.597			-1.527	-1.013
PLD1	0	-0.150	-0.140
MAPK3	0
NFKB1	0	0.720	-0.810
PIK3CA	0
ELK1	0
RAC1	0	-0.580	1.580	0.486			-0.364	-0.568
AKT1	0	-0.050	0.700
AKT1	0	0.860	-0.040
PIK3R1	0	1.910	-1.220				-0.441	0.147
BCL2L1	0
RELA	0	-1.130	1.600	0.793
HRAS	0	1.470	-0.520
CHUK	0			-0.480

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AKT1	Phosphorylation	S124	0.252	0.311	_SGS(ph)PSDNSGAEEMEVSLAKPK_
AKT1	Phosphorylation	S126	-0.241		_SGSPS(ph)DNSGAEEM(ox)EVSLAK_
AKT1	Ubiquitylation	K301	0.988		_EGIK(gl)DGATMK_
BAD	Phosphorylation	S74	-0.904	-0.452	_HS(ph)SYPAGTEDDEGM(ox)GEEPSPFR_
BAD	Phosphorylation	S75	-0.914	-0.660	_HSS(ph)YPAGTEDDEGMGEEPSPFR_
BAD	Phosphorylation	S97		0.056	_S(ph)RSAPPNLWAAQR_
BAD	Phosphorylation	S99	-0.299	0.161	_S(ph)APPNLWAAQR_
BAD	Phosphorylation	S118	1.277	1.089	_RM(ox)S(ph)DEFVDSFKK_
BCL2L1	Ubiquitylation	K87	0.026		_EVIPMAAVK(gl)QALR_
CDC42	Ubiquitylation	K173	-1.839		_DDPSTIEK(gl)LAK_
CDC42	Ubiquitylation	K178	-0.801	-0.716	_NK(gl)QKPITPETAEK_
CDC42	Ubiquitylation	K180	-1.806		_QK(gl)PITPETAEK(gl)LAR_
CDC42	Ubiquitylation	K189	-1.082		_QKPITPETAEK(gl)LAR_
CDC42	Ubiquitylation	K198	0.550	1.159	_AVK(gl)YVECSALTQK_
CDC42	Ubiquitylation	K208	-0.937	0.038	_YVECSALTQK(gl)GLK_
CDC42	Ubiquitylation	K228	-2.488		_NVFDEAILAALEPPEPK(gl)K_
CDC42	Ubiquitylation	K229	-1.254		_NVFDEAILAALEPPEPKK(gl)_
CHUK	Ubiquitylation	K296		-1.637	_GGPVDLTLK(gl)QPR_
ELK1	Phosphorylation	S273	-0.601	-0.553	_PAVVLPSAAPAGAAAPPS(ph)GSR_
ELK1	Phosphorylation	S275	-0.601	-0.553	_PAVVLPSAAPAGAAAPPS(ph)GSR_
ELK1	Phosphorylation	S403	0.568	-0.579	_DLELPLS(ph)PSLLGGPGPER_
HRAS	Ubiquitylation	K170	-1.005		_K(gl)LNPPDESGPGCMSCK_
MAP2K1	Ubiquitylation	K192	-0.205	-0.241	_DVK(gl)PSNILVNSR_
MAP2K1	Phosphorylation	S385		0.066	_RSDAEEVDFAGWLCSTIGLNQPS(ph)TPTHAAGV_
MAP2K1	Phosphorylation	T386		0.377	_RSDAEEVDFAGWLCSTIGLNQPST(ph)PTHAAGV_
MAPK3	Phosphorylation	Y204	-0.807	-2.487	_IADPEHDHTGFLTEY(ph)VATR_
MAPK3	Ubiquitylation	K289		-0.608	_NYLQSLPSKTK(gl)_
NFKB1	Phosphorylation	S907	-0.025	0.113	_TTSQAHSLPLS(ph)PASTR_
PIK3CA	Ubiquitylation	K864	0.390	0.588	_NSHTIM(ox)QIQCK(gl)GGLK_
PIK3CA	Ubiquitylation	K868	0.204	0.651	_NSHTIM(ox)QIQCKGGLK(gl)_
PIK3CA	Ubiquitylation	K974	-0.273		_GAQECTK(gl)TREFER_
PLD1	Ubiquitylation	K501		-0.155	_LTDVGSVK(gl)R_
PLD1	Ubiquitylation	K547	0.453	1.120	_SIDDVDSK(gl)LK_
PLD1	Ubiquitylation	K549		1.120	_SIDDVDSK(gl)LK_
PLD1	Ubiquitylation	K1000	-0.600		_NATIYDK(gl)VFR_
RAC1	Ubiquitylation	K115	-1.745	-0.215	_AK(gl)WYPEVR_
RAC1	Ubiquitylation	K142	0.492		_LDLRDDK(gl)DTIEK_
RAC1	Ubiquitylation	K152	0.099	-0.292	_K(gl)LTPITYPQGLAMAK_
RAC1	Ubiquitylation	K166	-0.981	-0.655	_LTPITYPQGLAMAK(gl)EIGAVK_
RAC1	Ubiquitylation	K172	1.026	0.412	_EIGAVK(gl)YLECSALTQR_
RAC1	Ubiquitylation	K185	-0.113	0.578	_GLK(gl)TVFDEAIR_
RAC1	Ubiquitylation	K202	-1.379	-1.447	_AVLCPPPVK(gl)KR_
RAC1	Ubiquitylation	K203	-1.708	-1.447	_AVLCPPPVKK(gl)_
RAF1	Phosphorylation	S29	0.028	-0.571	_DAVFDGSSCIS(ph)PTIVQQFGYQR_
RAF1	Phosphorylation	T31	0.028	-0.669	_DAVFDGSSCIS(ph)PTIVQQFGYQR_
RAF1	Phosphorylation	S244		0.053	_YSTPHAFTFNTSS(ph)PSSEGSLSQR_
RAF1	Phosphorylation	S259	-0.069	0.054	_STS(ph)TPNVHM(ox)VSTTLPVDSR_
RAF1	Phosphorylation	S301		-0.651	_SHSESASPSALSSSPNNLS(ph)PTGWSQPK_
RAF1	Phosphorylation	T303		-0.664	_SHSESASPSALSSSPNNLSPT(ph)GWSQPK_
RAF1	Phosphorylation	S497		-0.449	_SRWS(ph)GSQQVEQPTGSVLWMAPEVIR_
RAF1	Phosphorylation	S621	0.212	0.271	_SAS(ph)EPSLHR_
RAF1	Phosphorylation	S642	-0.197	0.463	_AAHTEDINACTLTTS(ph)PR_
RALA	Ubiquitylation	K7	0.700		_(ac)AANKPK(gl)GQNSLALHK_
RALA	Ubiquitylation	K134	0.656	-0.585	_SDLEDK(gl)RQVSVEEAK_
RALA	Ubiquitylation	K143		-0.388	_QVSVEEAK(gl)NR_
RALBP1	Phosphorylation	S10		-0.478	_(ac)TECFLPPTS(ph)SPSEHR_
RALBP1	Phosphorylation	S11	-0.587	-0.381	_(ac)TECFLPPTSS(ph)PSEHRR_
RALBP1	Phosphorylation	S13	-0.465		_(ac)TECFLPPTSSPS(ph)EHR_
RALBP1	Phosphorylation	S29	-0.625	-1.152	_TPS(ph)SEEISPTK_
RALBP1	Phosphorylation	S30		-1.015	_TPSS(ph)EEISPTKFPGLYR_
RALBP1	Phosphorylation	S645	-0.718	-0.600	_AGKEPAKPS(ph)PSR_
RHOA	Ubiquitylation	K6	0.708		_K(gl)KLVIVGDGACGK_
RHOA	Ubiquitylation	K7	0.708		_K(gl)KLVIVGDGACGK_
RHOA	Ubiquitylation	K118	-0.408		_HFCPNVPIILVGNK(gl)K_
RHOA	Ubiquitylation	K119	-0.408		_HFCPNVPIILVGNK(gl)K_
RHOA	Ubiquitylation	K135	-0.528	-0.796	_MK(gl)QEPVKPEEGRDMANR_
RHOA	Ubiquitylation	K162	0.345	0.453	_IGAFGYMECSAK(gl)TK_