RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
MATR3	2	0.330	-0.770	0.616	-1.792	-0.824	-0.795	-0.093
MATR3	2	0.330	-0.770	-0.059	-2.461	-1.002
ZNF318	2	-0.360	0.200				-1.177	-0.005
ZFR	1	-1.300	2.040	-0.754	-0.524	-0.141	-1.281	-0.329
ZFHX2	1	-1.110	2.690				-0.450	0.018
TRIT1	0	-0.560	0.070
ZNF638	0	0.260	-0.470	0.646	-0.149	-0.557	0.575	0.264
ZCCHC6	0	-0.370	0.050
ZFHX4	0	0.080	-0.340				-0.450	0.018
SF3A2	0	-1.400	2.280	0.210	-0.671	0.296	-0.187	0.298
ZNF346	0	0.240	-0.650		-0.839	-0.370
SNRPC	0	-0.200	0.800		-0.392	0.470	0.128	-0.891
SCAPER	0	-0.980	0.880
ZFHX3	0	-0.200	0.390				-0.903	-0.394
ZMAT2	0	-0.600	1.170
CIZ1	0	-1.090	1.560	-0.868	-1.004	-0.041	-0.620	-0.663
DNAJC21	0	0.670	-0.720				-0.965
ZNF830	0	-0.030	-0.360
RBM20	0	-0.060	-0.060	1.235

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CIZ1	Phosphorylation	T244		-0.378	_EKRT(ph)PAPEPEPCEASELPAK_
CIZ1	Phosphorylation	T585	-0.845	-1.870	_PSDSVSSTPAATST(ph)PSK_
CIZ1	Phosphorylation	S864	-0.732	-0.360	_NPS(ph)PTTRPVSR_
DNAJC21	Phosphorylation	S370	-0.493	-0.307	_QQLEEEEENFSRPQIDENPLDDNS(ph)EEEM(ox)EDAPK_
MATR3	Ubiquitylation	K3	-0.669	-0.130	_(ac)SK(gl)SFQQSSLSR_
MATR3	Phosphorylation	S9	1.062	1.758	_SFQQSS(ph)LSR_
MATR3	Phosphorylation	T150		1.273	_RRT(ph)EEGPTLSYGR_
MATR3	Phosphorylation	S164	-0.799	-0.754	_S(ph)ATREPPYR_
MATR3	Ubiquitylation	K181	0.418	0.703	_DDWEEK(gl)R_
MATR3	Phosphorylation	S188	0.552	0.352	_RDS(ph)FDDR_
MATR3	Phosphorylation	S195	0.999	0.590	_RDSFDDRGPS(ph)LNPVLDYDHGSR_
MATR3	Phosphorylation	S206	-0.408	2.048	_GPSLNPVLDYDHGS(ph)R_
MATR3	Phosphorylation	S208	3.082	2.840	_S(ph)QESGYYDR_
MATR3	Phosphorylation	S211		1.684	_DSFDDRGPSLNPVLDYDHGSRSQES(ph)GYYDR_
MATR3	Ubiquitylation	K491	-0.193	0.356	_FDQK(gl)QELGR_
MATR3	Ubiquitylation	K522	-1.136	-0.691	_LAEPYGK(gl)IK_
MATR3	Ubiquitylation	K524	-0.770		_LAEPYGKIK(gl)_
MATR3	Ubiquitylation	K554	-0.121	0.185	_EDAMAMVDHCLK(gl)K_
MATR3	Ubiquitylation	K555	0.016	0.639	_K(gl)ALWFQGR_
MATR3	Ubiquitylation	K565	0.765		_CVK(gl)VDLSEK_
MATR3	Ubiquitylation	K571	0.335		_VDLSEK(gl)YK_
MATR3	Ubiquitylation	K588	-0.137	0.306	_GIDLLK(gl)K_
MATR3	Ubiquitylation	K589		0.306	_GIDLLK(gl)K_
MATR3	Phosphorylation	S596	-0.031	0.457	_RS(ph)YSPDGK_
MATR3	Phosphorylation	S598	0.251	0.233	_SYS(ph)PDGKESPSDK_
MATR3	Phosphorylation	S604	1.224	1.629	_SYS(ph)PDGKES(ph)PSDK_
MATR3	Phosphorylation	T612	2.910	2.961	_T(ph)DGSQKTESSTEGKEQEEK_
MATR3	Phosphorylation	S615	2.286	2.251	_TDGS(ph)QKTESSTEGKEQEEK_
MATR3	Phosphorylation	S621	2.639	1.672	_TDGSQKTESS(ph)TEGKEQEEK_
MATR3	Phosphorylation	S814		-1.235	_NEENTEPGAESSENADDPNKDTSENADGQS(ph)DENKDDYTIPDEYR_
MATR3	Ubiquitylation	K880	1.094		_LKK(gl)FLNK_
MATR3	Ubiquitylation	K884	0.657	0.492	_FLNK(gl)LAEERR_
RBM20	Phosphorylation	S660		-0.005	_SHTPSFTSCSSSHS(ph)PPGPSR_
RBM20	Phosphorylation	S740	-0.479	0.069	_S(ph)GSPNLPHSVSSYK_
RBM20	Phosphorylation	S742	-0.012	-0.169	_SGS(ph)PNLPHSVSSYK_
RBM20	Phosphorylation	S876	0.321	0.370	_EAEFS(ph)DPENTR_
RBM20	Phosphorylation	S1047	-0.393	-0.337	_GVESSDVHPAPTVQQMS(ph)SPKPAEER_
RBM20	Phosphorylation	S1048	-0.208	-0.438	_GVESSDVHPAPTVQQMSS(ph)PKPAEER_
RBM20	Phosphorylation	S1060	0.101	0.255	_ARQPS(ph)PFVDDCK_
RBM20	Phosphorylation	S1120	0.952	1.033	_SLEVRS(ph)PEYTEVELK_
SCAPER	Phosphorylation	S86		0.674	_ITSSTTGDKHFDKS(ph)PTK_
SCAPER	Phosphorylation	S185	0.060		_HVIPS(ph)PSTDR_
SF3A2	Ubiquitylation	K91	-1.755		_EAK(gl)EAPAQPAPEK_
SF3A2	Ubiquitylation	K103	0.607		_VK(gl)VEVKK_
SF3A2	Ubiquitylation	K107	0.324		_VKVEVK(gl)K_
SNRPC	Ubiquitylation	K3	-0.162		_PK(gl)FYCDYCDTYLTHDSPSVR_
SNRPC	Phosphorylation	S17	-0.713	0.002	_FYCDYCDTYLTHDS(ph)PSVR_
SNRPC	Phosphorylation	S19		0.125	_FYCDYCDTYLTHDSPS(ph)VRK_
SNRPC	Ubiquitylation	K35	0.999		_ENVK(gl)DYYQK_
TRIT1	Ubiquitylation	K391		-0.726	_MPYNEAENK(gl)R_
TRIT1	Phosphorylation	S443	0.119	0.431	_RLDSDAVNTIESQSVS(ph)PDHNKEPK_
ZCCHC6	Ubiquitylation	K602	0.001	0.416	_IAIEDPYSVK(gl)R_
ZCCHC6	Phosphorylation	T1414		-0.734	_EDKPIQCT(ph)PQK_
ZFHX2	Phosphorylation	S508	0.047	-0.020	_DFPLLNQSIS(ph)PLSSSVLK_
ZFHX2	Phosphorylation	S2769		0.961	_NLLS(ph)PSSFK_
ZFHX3	Phosphorylation	S425	-0.531	-0.563	_TPITSVPLGPLAS(ph)SPTK_
ZFHX4	Phosphorylation	S508	0.047	-0.020	_DFPLLNQSIS(ph)PLSSSVLK_
ZFHX4	Phosphorylation	S2769		0.961	_NLLS(ph)PSSFK_
ZFR	Ubiquitylation	K796	0.294	0.615	_VGVLAK(gl)GLLLR_
ZFR	Phosphorylation	S1054	1.650	1.016	_RRDS(ph)DGVDGFEAEGK_
ZMAT2	Ubiquitylation	K61	-0.150		_VDLESK(gl)LGK_
ZNF318	Phosphorylation	S39	-0.744		_RS(ph)SPPPPPSGSSSR_
ZNF318	Phosphorylation	S40	-1.125	-0.848	_RSS(ph)PPPPPSGSSSR_
ZNF318	Phosphorylation	S136	0.216	0.222	_S(ph)PGLCSDSLEK_
ZNF318	Phosphorylation	S143		2.226	_RRSPGLCSDS(ph)LEK_
ZNF318	Phosphorylation	S173	0.318	0.406	_LGS(ph)PVDNLEDMDRDDLTDDSVFTR_
ZNF318	Phosphorylation	S207	0.590	-0.031	_YIS(ph)QEEGPLSPFLGQLDEDYR_
ZNF318	Phosphorylation	S214	-0.201	-0.088	_YISQEEGPLS(ph)PFLGQLDEDYR_
ZNF318	Phosphorylation	S527	1.264	0.432	_S(ph)FPDIEDEEK_
ZNF318	Phosphorylation	S629	0.949	0.742	_PSLRSS(ph)ADR_
ZNF318	Phosphorylation	T1035		-1.018	_T(ph)KSPKPAESPQSATK_
ZNF318	Phosphorylation	S1037	-0.406	-0.577	_TKS(ph)PKPAESPQSATK_
ZNF318	Phosphorylation	S1267	-2.098	-1.628	_KES(ph)PTSSSFGK_
ZNF318	Phosphorylation	S1420	1.220	1.264	_AFGGEEVILKGS(ph)PEEK_
ZNF318	Phosphorylation	S1558		0.415	_RNS(ph)CLATANAK_
ZNF318	Phosphorylation	S1713	-1.463	0.606	_DIS(ph)PEKSELDLGEPGPPGVEPPPQLLDIQCK_
ZNF318	Phosphorylation	S1717	-1.785	-3.574	_DIS(ph)PEKSELDLGEPGPPGVEPPPQLLDIQCK_
ZNF318	Phosphorylation	S1856	1.611	2.324	_VVIKLS(ph)PQACSFTK_
ZNF318	Phosphorylation	S1896	-0.299	-0.398	_ISAPELLLHS(ph)PAR_
ZNF318	Phosphorylation	S2035		0.713	_VSPAHRS(ph)PTVLCQK_
ZNF318	Phosphorylation	S2101	-0.091	-0.104	_IPS(ph)PNILK_
ZNF318	Phosphorylation	S2189	0.876	0.915	_LCS(ph)PLSEPGDPSK_
ZNF638	Phosphorylation	S552	0.094	-0.495	_NPFRGS(ph)PK_
ZNF638	Phosphorylation	S1100	-0.484	-0.361	_IDLPEVQIEHDPELEKES(ph)PGLK_
ZNF638	Phosphorylation	S1401	-0.156	-0.335	_AVIVSS(ph)PK_
ZNF830	Phosphorylation	S351		0.673	_KEEENADS(ph)DDEGELQDLLSQDWR_