RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PAPD5	2	0.940	-0.220				0.000	0.344
UPF1	0			-0.362	-0.954	-0.781	-0.966	-0.333
MTPAP	0	0.330	-0.610	-1.406	-0.249	-0.194	-0.156	-0.001
XRN1	0	1.680	-1.120
XRN1	0	1.680	-1.120	-0.304			-0.943	0.164
ATM	0						0.398	0.474
PAPD4	0	0.510	-0.030
EXOSC10	0	0.160	-0.170		-0.327	-0.108	-0.734	-0.003

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ATM	Ubiquitylation	K307		-0.196	_GAYESTK(gl)WR_
ATM	Ubiquitylation	K331		-0.126	_GK(gl)YSSGFR_
ATM	Ubiquitylation	K385		-0.669	_ESSDYSVPCK(gl)R_
ATM	Ubiquitylation	K1101		-0.548	_LFQDTK(gl)GDSSR_
ATM	Ubiquitylation	K1109		-1.666	_LLK(gl)ALPLK_
ATM	Ubiquitylation	K1698		-1.026	_DASYTK(gl)ALK_
ATM	Ubiquitylation	K1738		-0.137	_SAAVTCLK(gl)NILATK_
ATM	Ubiquitylation	K2025		-1.497	_SIGEPDSLYGCGGGK(gl)MLQPITR_
EXOSC10	Ubiquitylation	K591		-1.148	_SEVAAGVK(gl)K_
EXOSC10	Ubiquitylation	K592		-1.148	_SEVAAGVK(gl)K_
EXOSC10	Ubiquitylation	K680		-1.926	_GPLTVAQKK(gl)_
EXOSC10	Ubiquitylation	K710		-1.867	_APVSQAAK(gl)FDPSTK_
EXOSC10	Ubiquitylation	K716		-2.215	_FDPSTK(gl)IYEISNR_
MTPAP	Ubiquitylation	K205		-0.626	_EFQLTEENTK(gl)LR_
MTPAP	Ubiquitylation	K497		-0.857	_NVSQSQLQK(gl)FVDLAR_
PAPD4	Ubiquitylation	K89		-1.510	_NLPLDGK(gl)R_
PAPD4	Phosphorylation	S95	-1.451	-1.494	_FHS(ph)PHQEPTVVNQIVPLSGER_
PAPD5	Phosphorylation	S610	2.432	1.764	_VGS(ph)QDVSLESSQAVGK_
UPF1	Ubiquitylation	K321		0.611	_LK(gl)ESQTQDNITVR_
UPF1	Ubiquitylation	K340	-1.693		_WDLGLNKK(gl)_
UPF1	Ubiquitylation	K378	-1.658		_YK(gl)GDLAPLWK_
UPF1	Ubiquitylation	K638	-2.024	-0.456	_LAK(gl)MQFR_
UPF1	Ubiquitylation	K790	0.647	0.880	_ITTK(gl)LLK_
UPF1	Ubiquitylation	K793	-2.075		_LLK(gl)AGAKPDQIGIITPYEGQR_
UPF1	Phosphorylation	S1107	0.100	0.763	_SQIDVALS(ph)QDSTYQGER_
XRN1	Phosphorylation	S814		-0.523	_ENEVQSSHHGEPPSEEHLS(ph)PQSFAM(ox)K_