RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
BRCA1	2	0.200	-0.140	0.433			0.018	0.146
DNMT1	2	0.150	-0.150		0.077	-0.109	-1.422	0.572
DNMT1	2	0.150	-0.150	0.134			-0.347	-0.054
KDM1A	1	-1.020	1.190				1.814	0.225
KDM1A	1	-1.020	1.190	0.355	0.031	0.593
KDM3A	1	-1.740	3.000
DNMT3B	0	0.990	-0.100				0.783	0.015

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
BRCA1	Phosphorylation	S123	0.465	0.445	_KENNSPEHLKDEVS(ph)IIQSM(ox)GYR_
BRCA1	Phosphorylation	S753	2.662	4.077	_VSNNAEDPKDLMLS(ph)GER_
BRCA1	Phosphorylation	S1009	0.733	1.028	_KNLLEENFEEHSM(ox)S(ph)PER_
BRCA1	Phosphorylation	S1546	1.821	2.105	_NYPS(ph)QEELIK_
BRCA1	Phosphorylation	S1564		3.065	_VVDVEEQQLEES(ph)GPHDLTETSYLPR_
BRCA1	Phosphorylation	S1664		1.120	_EKPELTAS(ph)TER_
DNMT1	Phosphorylation	S127	-0.755	-0.836	_VGM(ox)ADANS(ph)PPKPLSKPR_
DNMT1	Phosphorylation	S143	0.877	0.220	_SKS(ph)DGEAKPEPSPSPR_
DNMT1	Phosphorylation	S152	-0.685	-1.347	_SDGEAKPEPS(ph)PSPR_
DNMT1	Phosphorylation	S154	-1.926	-0.876	_SDGEAKPEPSPS(ph)PR_
DNMT1	Ubiquitylation	K586	1.686	3.368	_DLIK(gl)LAGVTLGQR_
DNMT1	Ubiquitylation	K675	1.267	0.915	_DMVK(gl)FGGSGR_
DNMT1	Phosphorylation	S714	-0.773	-0.554	_EADDDEEVDDNIPEMPS(ph)PKK_
DNMT1	Phosphorylation	S954	-0.318	0.057	_LSS(ph)PVKRPR_
DNMT1	Ubiquitylation	K961	-3.166		_K(gl)EPVDEDLYPEHYR_
DNMT1	Ubiquitylation	K981	-0.298	-1.482	_YSDYIK(gl)GSNLDAPEPYR_
DNMT1	Ubiquitylation	K997	0.042	0.154	_IK(gl)EIFCPK_
DNMT1	Ubiquitylation	K1483	1.983	-0.103	_GVCSCVEAGK(gl)ACDPAAR_
DNMT3B	Ubiquitylation	K597	0.236		_ELGIK(gl)VGK_
DNMT3B	Ubiquitylation	K623	0.433		_HEGNIK(gl)YVNDVR_
KDM1A	Phosphorylation	S69	-2.048	-2.645	_KEPPRAS(ph)PPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR_
KDM1A	Phosphorylation	T88	-1.832		_KEPPRASPPGGLAEPPGSAGPQAGPT(ph)VVPGSATPM(ox)ETGIAETPEGR_
KDM1A	Phosphorylation	S126	0.780	0.501	_EMDES(ph)LANLSEDEYYS(ph)EEER_
KDM1A	Phosphorylation	S131	0.204	0.473	_EM(ox)DESLANLS(ph)EDEYYS(ph)EEER_
KDM1A	Phosphorylation	S137	0.122	0.511	_EM(ox)DESLANLS(ph)EDEYYS(ph)EEER_
KDM1A	Phosphorylation	S166	-2.328	-2.624	_KLPPPPPQAPPEEENES(ph)EPEEPSGVEGAAFQSR_
KDM1A	Ubiquitylation	K296	-0.820		_IKPLPTK(gl)K_
KDM1A	Ubiquitylation	K297	-0.820		_IKPLPTK(gl)K_
KDM1A	Ubiquitylation	K507	-1.073		_DITAEFLVKSK(gl)_
KDM3A	Ubiquitylation	K851	-1.893		_NEIK(gl)CLPPLPPLSK_