Results for the Category
high-density lipoprotein particle remodeling
(GO:0034375)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| SCARB1 | 0 | 0.990 | -0.330 | |||||
| SCARB1 | 0 | 0.990 | -0.330 | -0.012 | -0.480 | |||
| APOA1 | 0 | 0.850 | -0.420 | -3.959 | ||||
| APOC1 | 0 | -0.540 | 1.560 | |||||
| ABCG1 | 0 | -0.770 | 2.080 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| ABCG1 | Ubiquitylation | K446 | -1.109 | _GK(gl)VCNLVPYLR_ | |
| APOC1 | Ubiquitylation | K47 | 0.667 | _EFGNTLEDK(gl)AR_ | |
| APOC1 | Ubiquitylation | K56 | 0.405 | _IK(gl)QSELSAK_ | |
| APOC1 | Ubiquitylation | K63 | -0.252 | _IKQSELSAK(gl)MR_ | |
| SCARB1 | Ubiquitylation | K480 | 0.325 | 0.520 | _GSVLQEAK(gl)L_ |
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