bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Category

Results for the Category
lipopolysaccharide-mediated signaling pathway
(GO:0031663)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
MAPK14 2 -0.160 -0.350
MTDH 2 0.690 -0.240 0.222 0.258
RIPK2 1 -1.740 3.580
LYN 1 -1.790 3.770
LYN 1 -1.790 3.770
SCARB1 0 0.990 -0.330
SCARB1 0 0.990 -0.330 -0.012 -0.480
MAPK3 0
TGFB1 0 -0.550 1.050
STAT1 0 -0.550 0.170
IRF3 0 -0.190 -0.050

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
IRF3 Phosphorylation S173 -0.663 -1.111 _S(ph)PSLDNPTPFPNLGPSENPLK_
IRF3 Phosphorylation S175 -0.663 -0.661 _S(ph)PSLDNPTPFPNLGPSENPLKR_
IRF3 Ubiquitylation K193 -3.309 -3.157 _SPSLDNPTPFPNLGPSENPLK(gl)R_
LYN Ubiquitylation K20 -0.592 _GKDSLSDDGVDLK(gl)TQPVR_
LYN Ubiquitylation K40 0.100 _DPTSNK(gl)QQRPVPESQLLPGQR_
LYN Phosphorylation S104 0.944 0.841 _DSLS(ph)DDGVDLK_
LYN Ubiquitylation K213 0.441 _HYQK(gl)QADGLCR_
LYN Ubiquitylation K477 -0.191 _VENCPDELYDIMK(gl)MCWK_
MAPK14 Phosphorylation S2 3.221 3.623 _(ac)S(ph)QERPTFYR_
MAPK14 Phosphorylation T180 0.958 1.087 _HTDDEM(ox)T(ph)GYVATR_
MAPK14 Phosphorylation Y182 1.388 1.374 _HTDDEM(ox)TGY(ph)VATR_
MAPK14 Ubiquitylation K249 0.073 -1.380 _LVGTPGAELLKK(gl)_
MAPK3 Phosphorylation Y204 -0.807 -2.487 _IADPEHDHTGFLTEY(ph)VATR_
MAPK3 Ubiquitylation K289 -0.608 _NYLQSLPSKTK(gl)_
MTDH Phosphorylation T143 -0.168 _TVEVAEGEAVRT(ph)PQSVTAK_
MTDH Phosphorylation S298 3.215 2.229 _LSSQIS(ph)AGEEK_
MTDH Phosphorylation S308 -1.181 -0.077 _WNSVS(ph)PASAGK_
MTDH Phosphorylation S426 0.024 0.054 _SQEPIPDDQKVS(ph)DDDKEK_
MTDH Ubiquitylation K504 -0.009 _TISTSDPAEVLVK(gl)NSQPIK_
MTDH Phosphorylation S568 -1.097 -0.503 _SETSWES(ph)PK_
RIPK2 Ubiquitylation K410 -2.810 _AAFCDHK(gl)TTPCSSAIINPLSTAGNSER_
RIPK2 Phosphorylation S531 0.884 0.839 _SPS(ph)LNLLQNK_
RIPK2 Ubiquitylation K538 -2.659 _SPSLNLLQNK(gl)SM_
SCARB1 Ubiquitylation K480 0.325 0.520 _GSVLQEAK(gl)L_
STAT1 Phosphorylation S727 1.377 0.974 _LQTTDNLLPMS(ph)PEEFDEVSR_
TGFB1 Ubiquitylation K50 -0.557 _GQILSK(gl)LR_


© Copyright Svejstrup Laboratory 2015