Results for the Category
positive regulation of mRNA 3'-end processing
(GO:0031442)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| PAF1 | 1 | 0.390 | -0.320 | 1.232 | 0.546 | 1.561 | -0.837 | 0.458 |
| CDC73 | 1 | 1.000 | -0.660 | 1.109 | 0.620 | 1.610 | -0.862 | 0.436 |
| LEO1 | 1 | -0.730 | 0.200 | 1.072 | 0.738 | 1.390 | 1.163 | 0.646 |
| CCNB1 | 0 | -0.410 | -0.128 | 0.212 | -0.166 | -0.523 | ||
| NCBP1 | 0 | -0.510 | 0.770 | 1.020 | -0.130 | 0.769 | -0.383 | 0.710 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| CCNB1 | Ubiquitylation | K18 | -0.455 | _AK(gl)INMAGAK_ | |
| CCNB1 | Ubiquitylation | K36 | -1.833 | -2.301 | _VPTAPAATSK(gl)PGLRPR_ |
| CCNB1 | Ubiquitylation | K59 | -0.659 | _VSEQLQAK(gl)MPMK_ | |
| CCNB1 | Ubiquitylation | K288 | 0.578 | _QMEMK(gl)ILR_ | |
| CDC73 | Ubiquitylation | K136 | 0.034 | _AADEVLAEAK(gl)KPR_ | |
| CDC73 | Ubiquitylation | K161 | 1.275 | _LEGHK(gl)EGIVQTEQIR_ | |
| CDC73 | Ubiquitylation | K198 | 0.681 | _STIK(gl)TDLDDDITALK_ | |
| CDC73 | Ubiquitylation | K209 | -0.003 | -1.671 | _TDLDDDITALK(gl)QR_ |
| CDC73 | Ubiquitylation | K243 | 0.937 | _TTILQSTGK(gl)NFSK_ | |
| CDC73 | Ubiquitylation | K247 | 0.739 | _TTILQSTGKNFSK(gl)_ | |
| CDC73 | Ubiquitylation | K283 | -0.189 | _TK(gl)QPIPAAYNR_ | |
| LEO1 | Phosphorylation | S10 | 0.712 | _(ac)ADMEDLFGS(ph)DADSEAER_ | |
| LEO1 | Phosphorylation | S14 | 1.186 | _(ac)ADMEDLFGSDADS(ph)EAER_ | |
| LEO1 | Ubiquitylation | K415 | 1.075 | _LK(gl)VENTIR_ | |
| LEO1 | Ubiquitylation | K486 | 1.353 | _QGTGLQGQAVFK(gl)TK_ | |
| LEO1 | Ubiquitylation | K503 | 1.640 | _K(gl)MTLSLADR_ | |
| LEO1 | Ubiquitylation | K537 | 0.452 | _TEMIK(gl)KEEER_ | |
| LEO1 | Phosphorylation | T629 | 0.613 | _KLT(ph)SDEEGEPSGK_ | |
| LEO1 | Phosphorylation | S630 | 0.373 | 0.499 | _LTS(ph)DEEGEPSGK_ |
| LEO1 | Phosphorylation | S658 | 0.549 | 0.449 | _YVIS(ph)DEEEEDDD_ |
| NCBP1 | Phosphorylation | T21 | 0.500 | 1.259 | _KT(ph)SDANETEDHLESLICK_ |
| NCBP1 | Phosphorylation | S22 | 1.091 | 1.381 | _KTS(ph)DANETEDHLESLICK_ |
| NCBP1 | Ubiquitylation | K204 | 0.269 | _IFANTESYLK(gl)R_ | |
| PAF1 | Ubiquitylation | K62 | -0.086 | -0.282 | _FVQYK(gl)ATSLEK_ |
| PAF1 | Ubiquitylation | K119 | -1.018 | _LLEEEIQAPTSSK(gl)R_ | |
| PAF1 | Ubiquitylation | K133 | 0.847 | _K(gl)TEYISTEFNR_ | |
| PAF1 | Ubiquitylation | K188 | -1.529 | _TFEDAQK(gl)SISQHYSKPR_ | |
| PAF1 | Ubiquitylation | K196 | -1.455 | -1.126 | _SISQHYSK(gl)PR_ |
| PAF1 | Ubiquitylation | K300 | -1.882 | -0.738 | _EYNWNVK(gl)NK_ |
| PAF1 | Ubiquitylation | K338 | 0.621 | -0.090 | _AK(gl)AGVQSGTNALLVVK_ |
| PAF1 | Ubiquitylation | K352 | -0.333 | -0.469 | _AGVQSGTNALLVVK(gl)HR_ |
.
© Copyright Svejstrup Laboratory 2015