Results for the Category
DNA double-strand break processing
(GO:0000729)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| SMARCAD1 | 2 | 0.070 | 0.540 | -0.030 | 1.060 | 0.612 | 0.381 | 0.353 |
| DNA2 | 1 | 1.707 | ||||||
| UBE2V2 | 0 | -0.070 | 0.120 | |||||
| BLM | 0 | 1.270 | -0.830 | -0.850 | -0.141 | 0.144 | 0.151 | 0.149 |
| BLM | 0 | 1.270 | -0.830 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| BLM | Phosphorylation | S144 | 1.234 | _KLEFSSS(ph)PDSLSTINDWDDMDDFDTSETSK_ | |
| DNA2 | Ubiquitylation | K589 | -1.040 | _LMENTFVSK(gl)K_ | |
| DNA2 | Ubiquitylation | K590 | -1.040 | _LMENTFVSK(gl)K_ | |
| DNA2 | Ubiquitylation | K811 | -0.860 | _ALGMSESLFK(gl)R_ | |
| SMARCAD1 | Phosphorylation | T54 | -0.579 | -0.089 | _ANT(ph)PDSDITEK_ |
| SMARCAD1 | Phosphorylation | S79 | 1.866 | 0.866 | _KAS(ph)ISYFK_ |
| SMARCAD1 | Phosphorylation | S95 | -0.165 | _GIQYIDLS(ph)SDSEDVVSPNCSNTVQEK_ | |
| SMARCAD1 | Phosphorylation | S152 | 1.382 | 1.569 | _RNDDISELEDLS(ph)ELEDLKDAK_ |
| SMARCAD1 | Phosphorylation | S211 | 0.248 | _KLS(ph)SSSEPYEEDEFNDDQSIKK_ | |
| UBE2V2 | Ubiquitylation | K8 | -0.337 | -0.243 | _(ac)AVSTGVK(gl)VPR_ |
| UBE2V2 | Ubiquitylation | K66 | -0.608 | _IYSLK(gl)VECGPK_ | |
| UBE2V2 | Ubiquitylation | K72 | -0.575 | -0.545 | _VECGPK(gl)YPEAPPSVR_ |
| UBE2V2 | Ubiquitylation | K129 | 0.440 | 0.709 | _LMMSK(gl)ENMK_ |
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