bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Category

Results for the Category
RNA polymerase II complex, incomplete (CDK8 complex), chromatin structure modifying
(3067)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
SMARCB1 1 0.850 -0.060 0.041 -0.003 0.699 0.354 -0.731
SMARCB1 1 0.850 -0.060 0.738 1.594
CCNC 0 0.760 -0.860
GTF2F1 0 -0.280 0.230 -3.106 1.494 -0.308
CCNH 0 1.480 -0.550
SMARCC2 0 -0.770 0.630
SMARCC2 0 -0.770 0.630 0.151 0.139 0.622 0.709 0.505
SMARCC1 0 0.140 0.090 0.553 0.112 0.584 0.137 0.136

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
CCNC Ubiquitylation K117 0.126 _LIAAATSVLK(gl)TR_
CCNH Ubiquitylation K189 0.418 _K(gl)TADDFLNR_
GTF2F1 Phosphorylation S385 0.043 0.017 _GNS(ph)RPGT(ph)PSAEGGSTSSTLR_
GTF2F1 Phosphorylation T389 0.484 -0.150 _GNS(ph)RPGT(ph)PSAEGGSTSSTLR_
GTF2F1 Phosphorylation S391 -0.032 -0.039 _GNS(ph)RPGTPS(ph)AEGGSTSSTLR_
GTF2F1 Phosphorylation S433 -0.395 -0.554 _LDTGPQSLS(ph)GK_
GTF2F1 Phosphorylation T445 0.385 0.574 _T(ph)TPNSGDVQVTEDAVR_
GTF2F1 Phosphorylation T446 0.385 0.574 _T(ph)TPNSGDVQVTEDAVR_
SMARCB1 Ubiquitylation K13 0.411 -0.949 _TFGQK(gl)PVK_
SMARCB1 Ubiquitylation K208 -0.170 _LDMEIDGQK(gl)LR_
SMARCC1 Phosphorylation S310 -0.047 0.123 _NEEPVRS(ph)PERR_
SMARCC1 Phosphorylation S328 -0.755 -0.358 _KHS(ph)PS(ph)PPPPTPTESR_
SMARCC1 Phosphorylation S330 -0.755 -1.491 _KHS(ph)PS(ph)PPPPTPTESR_
SMARCC1 Ubiquitylation K588 -0.831 _SPQVPAAQQMLNFPEK(gl)NK_
SMARCC1 Ubiquitylation K590 -0.737 _NK(gl)EKPVDLQNFGLR_
SMARCC1 Ubiquitylation K592 -0.509 _EK(gl)PVDLQNFGLR_
SMARCC1 Ubiquitylation K608 -0.342 0.588 _TDIYSK(gl)K_
SMARCC1 Ubiquitylation K609 -0.053 0.520 _TDIYSKK(gl)_
SMARCC1 Ubiquitylation K716 0.001 _VASAAAK(gl)AALEEFSR_
SMARCC1 Ubiquitylation K882 0.402 _AK(gl)HLAAVEER_
SMARCC2 Ubiquitylation K161 -0.199 _LKDIIK(gl)R_
SMARCC2 Phosphorylation S283 0.602 0.869 _TLTDEVNS(ph)PDSDRR_
SMARCC2 Phosphorylation S302 -0.755 -0.668 _RS(ph)PSPSPTPEAK_
SMARCC2 Phosphorylation S347 -0.627 -0.862 _DMDEPS(ph)PVPNVEEVTLPK_
SMARCC2 Ubiquitylation K455 -0.775 _ALPEFFNGKNK(gl)_
SMARCC2 Ubiquitylation K694 0.389 _VASAAAK(gl)SALEEFSK_
SMARCC2 Ubiquitylation K872 -0.712 _DIGEGNLSTAAAAALAAAAVK(gl)AK_
SMARCC2 Ubiquitylation K874 0.402 _AK(gl)HLAAVEER_
SMARCC2 Ubiquitylation K902 0.641 0.460 _KLEIK(gl)LR_


© Copyright Svejstrup Laboratory 2015