bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: TTC7A

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TTC7A 0 -1.775 0.820 -0.780

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TTC7A Ubiquitylation K824 -1.775 _SLAQK(gl)VLR_

Background Information for TTC7A:





Protein-protein Interactions for TTC7A

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CHMP4B Cat. description Hein, Mann, Cell 2015
Category members IP bait CORO1C Cat. description Hein, Mann, Cell 2015
Category members IP bait HDAC6 Cat. description Hein, Mann, Cell 2015
Category members IP bait TTC7A Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TTC7A

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members TPR_1 IPR001440 1.39
Category members TPR-contain_dom IPR013026 0.97
Category members TPR_repeat IPR019734 0.93
Category members TPR_2 IPR013105 0.45


Protein complexes (CORUM database) featuring TTC7A

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TTC7A

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members Disease phenotype Autosomal_recessive_early-onset_inflammatory_bowel_disease Autosomal recessive early-onset inflammatory bowel disease Database 0.04
Category members GO Category GO:0006879 cellular iron ion homeostasis Database 0
Category members GO Category GO:0030097 hemopoiesis Database 0


© Copyright Svejstrup Laboratory 2015