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Query: TEFM

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TEFM 0 1.168 0.070 0.580

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TEFM Ubiquitylation K137 0.588 _STVQVCNSILCPK(gl)TGR_

Background Information for TEFM:


Pubmed-TEFM »
Uniprot-TEFM »
Biogrid-TEFM »
ProteomicsDB-TEFM »

Tumorportal-TEFM »
COSMIC-TEFM »
GenomeRNAi-TEFM »
Genecards-TEFM


Protein-protein Interactions for TEFM
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CCDC9 Cat. description Hein, Mann, Cell 2015
Category members IP bait KBTBD7 Cat. description Hein, Mann, Cell 2015
Category members IP bait PCNA Cat. description Hein, Mann, Cell 2015


Protein Domains in TEFM
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members RNaseH-like_dom IPR012337 0


Protein complexes (CORUM database) featuring TEFM
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TEFM
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0030529 ribonucleoprotein complex Database 8.45
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0042645 mitochondrial nucleoid Database 0.61
Category members GO Category GO:0005759 mitochondrial matrix Database 0.59
Category members GO Category GO:0030337 DNA polymerase processivity factor activity Database 0.09
Category members GO Category GO:0006390 transcription from mitochondrial promoter Database 0.07
Category members GO Category GO:0006119 oxidative phosphorylation Database 0
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0


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