bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: SUMO2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SUMO2 1 4.662 1.500 -1.300 2.569
SUMO2 1 4.662 1.500 -1.300 0.164 1.233 -0.094

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SUMO2 Ubiquitylation K33 0.858 -0.068 _VAGQDGSVVQFK(gl)IKR_
SUMO2 Ubiquitylation K21 0.528 -0.324 _TENNDHINLK(gl)VAGQDGSVVQFK_
SUMO2 Ubiquitylation K45 0.331 -0.384 _LMK(gl)AYCER_
SUMO2 Ubiquitylation K11 -0.162 -0.900 _EGVK(gl)TENDHINLK_
SUMO2 Ubiquitylation K11 0.075 -1.315 _EGVK(gl)TENNDHINLK_
SUMO2 Ubiquitylation K35 0.665 -1.315 _VAGQDGSVVQFKIK(gl)_
SUMO2 Ubiquitylation K5 0.184 -1.406 _(ac)ADEK(gl)PK(gl)EGVK_
SUMO2 Ubiquitylation K5 -0.624 -1.539 _(ac)SEEK(gl)PKEGVK_
SUMO2 Ubiquitylation K42 0.395 -1.599 _HTPLSK(gl)LMK_
SUMO2 Ubiquitylation K7 0.289 -1.855 _(ac)ADEKPK(gl)EGVK_
SUMO2 Ubiquitylation K7 0.408 -1.890 _(ac)SEEKPK(gl)EGVK_

Background Information for SUMO2:


Pubmed-SUMO2 »
Uniprot-SUMO2 »
Biogrid-SUMO2 »
ProteomicsDB-SUMO2 »

Tumorportal-SUMO2 »
COSMIC-SUMO2 »
GenomeRNAi-SUMO2 »
Genecards-SUMO2


Protein-protein Interactions for SUMO2
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait NUP107 Cat. description Hein, Mann, Cell 2015
Category members IP bait NUP153 Cat. description Hein, Mann, Cell 2015
Category members IP bait NUP98 Cat. description Hein, Mann, Cell 2015
Category members IP bait RANBP2 Cat. description Hein, Mann, Cell 2015
Category members IP bait RCC1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SAE1 Cat. description Hein, Mann, Cell 2015
Category members IP bait UBE2I Cat. description Hein, Mann, Cell 2015
Category members IP bait UBE2I Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SUMO2
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Rad60/SUMO_like IPR022617 1.93
Category members Ubiquitin-rel_dom IPR029071 1.79
Category members Ubiquitin-like IPR000626 1.61


Protein complexes (CORUM database) featuring SUMO2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SUMO2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members GO Category GO:0031625 ubiquitin protein ligase binding Database 2.54
Category members GO Category GO:0016605 PML body Database 1.41
Category members GO Category GO:0016925 protein sumoylation Database 0.33
Category members Pathway Pathway_45 PID_REG_GR_PATHWAY 0 0.31
Category members GO Category GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process Database 0.24


.

© Copyright Svejstrup Laboratory 2015