bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: STK39

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
STK39 0 0.711 1.920 -1.010

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
STK39 Phosphorylation S385 0.711 _TEDGDWEWS(ph)DDEMDEKSEEGK_

Background Information for STK39:


Pubmed-STK39 »
Uniprot-STK39 »
Biogrid-STK39 »
ProteomicsDB-STK39 »

Tumorportal-STK39 »
COSMIC-STK39 »
GenomeRNAi-STK39 »
Genecards-STK39


Protein-protein Interactions for STK39
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ARX Cat. description Hein, Mann, Cell 2015
Category members IP bait ATL2 Cat. description Hein, Mann, Cell 2015
Category members IP bait RHOA Cat. description Hein, Mann, Cell 2015
Category members IP bait KLRG2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LAMP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PTGIR Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RELL1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RELL2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RELT Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ST8SIA4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TOMM22 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TSC22D4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in STK39
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Kinase_OSR1/WNK_CCT IPR024678 0.04
Category members Kinase-like_dom IPR011009 0.03
Category members Prot_kinase_dom IPR000719 0
Category members Ser-Thr/Tyr_kinase_cat_dom IPR001245 0
Category members Ser/Thr_dual-sp_kinase IPR002290 0
Category members Tyr_kinase_cat_dom IPR020635 0


Protein complexes (CORUM database) featuring STK39
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 1123 WNK1-SPAk complex Database 0.17


Categories featuring STK39
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0004674 protein serine/threonine kinase activity Database 0.66
Category members GO Category GO:0005856 cytoskeleton Database 0.63
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0043268 positive regulation of potassium ion transport Database 0.44
Category members GO Category GO:0019901 protein kinase binding Database 0.37
Category members GO Category GO:0004672 protein kinase activity Database 0.19
Category members GO Category GO:0004702 receptor signaling protein serine/threonine kinase activity Database 0.1
Category members Pathway Pathway_687 PID_TCR_PATHWAY 0 0.08
Category members GO Category GO:0006468 protein phosphorylation Database 0.04
Category members GO Category GO:0016323 basolateral plasma membrane Database 0.04
Category members GO Category GO:0004713 protein tyrosine kinase activity Database 0.01
Category members GO Category GO:0006950 response to stress Database 0
Category members GO Category GO:0016324 apical plasma membrane Database 0
Category members GO Category GO:0016772 transferase activity, transferring phosphorus-containing groups Database 0
Category members GO Category GO:0023014 signal transduction by phosphorylation Database 0
Category members GO Category GO:0050727 regulation of inflammatory response Database 0


.

© Copyright Svejstrup Laboratory 2015