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Query: SNX27

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SNX27 1 1.805 0.670 -0.240 -0.887 0.166 0.054

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SNX27 Phosphorylation S51 1.585 _SES(ph)GYGFNVR_

Background Information for SNX27:


Pubmed-SNX27 »
Uniprot-SNX27 »
Biogrid-SNX27 »
ProteomicsDB-SNX27 »

Tumorportal-SNX27 »
COSMIC-SNX27 »
GenomeRNAi-SNX27 »
Genecards-SNX27


Protein-protein Interactions for SNX27
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ANAPC2 Cat. description Hein, Mann, Cell 2015
Category members IP bait TIGD6 Cat. description Hein, Mann, Cell 2015
Category members IP bait USB1 Cat. description Hein, Mann, Cell 2015
Category members IP bait C10orf47 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CDS1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CHRDL1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM19A3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FIG4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GPR156 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LRRC36 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MRAP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RASSF1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNX27 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VPS26B Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SNX27
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ubiquitin-rel_dom IPR029071 1.79
Category members Phox IPR001683 0.24
Category members PDZ IPR001478 0.15
Category members Ras-assoc IPR000159 0


Protein complexes (CORUM database) featuring SNX27
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SNX27
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0006886 intracellular protein transport Database 2.48
Category members GO Category GO:0005769 early endosome Database 1.26
Category members GO Category GO:0035091 phosphatidylinositol binding Database 0.62
Category members GO Category GO:0031901 early endosome membrane Database 0.58
Category members GO Category GO:0008333 endosome to lysosome transport Database 0.49
Category members GO Category GO:0016197 endosomal transport Database 0.43
Category members GO Category GO:0071203 WASH complex Database 0.31
Category members GO Category GO:0030904 retromer complex Database 0.14
Category members GO Category GO:0001772 immunological synapse Database 0
Category members GO Category GO:0007165 signal transduction Database 0
Category members GO Category GO:0032266 phosphatidylinositol-3-phosphate binding Database 0


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