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Query: SNIP1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SNIP1 1 2.453 1.160 -0.620

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SNIP1 Phosphorylation S153 0.008 0.248 _RTS(ph)NERPGSGQGQGR_
SNIP1 Phosphorylation S35 -0.473 -0.436 _QERLS(ph)PEVAPPAHR_
SNIP1 Phosphorylation S49 -0.946 _RPDHS(ph)GGSPSPPTSEPAR_
SNIP1 Phosphorylation S52 -1.157 -1.156 _RPDHSGGS(ph)PSPPTSEPAR_
SNIP1 Phosphorylation S200 2.205 _NDVGGGGS(ph)ESQELVPRPGGNNK_
SNIP1 Phosphorylation S202 2.205 _NDVGGGGS(ph)ESQELVPRPGGNNK_

Background Information for SNIP1:


Pubmed-SNIP1 »
Uniprot-SNIP1 »
Biogrid-SNIP1 »
ProteomicsDB-SNIP1 »

Tumorportal-SNIP1 »
COSMIC-SNIP1 »
GenomeRNAi-SNIP1 »
Genecards-SNIP1


Protein-protein Interactions for SNIP1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CLCN2 Cat. description Hein, Mann, Cell 2015
Category members IP bait FERMT3 Cat. description Hein, Mann, Cell 2015
Category members IP bait HAUS4 Cat. description Hein, Mann, Cell 2015
Category members IP bait KLC2 Cat. description Hein, Mann, Cell 2015
Category members IP bait SNIP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMEM184B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait WSB2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SNIP1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members FHA_dom IPR000253 2.3
Category members SMAD_FHA_domain IPR008984 0.86


Protein complexes (CORUM database) featuring SNIP1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SNIP1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members Pathway Pathway_845 PID_SMAD2_3NUCLEAR_PATHWAY 0 0.46
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0007249 I-kappaB kinase/NF-kappaB signaling Database 0
Category members GO Category GO:0035196 production of miRNAs involved in gene silencing by miRNA Database 0


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