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Query: RXRB

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RXRB 0 1.121 -0.900 1.680 -0.559

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for RXRB:


Pubmed-RXRB »
Uniprot-RXRB »
Biogrid-RXRB »
ProteomicsDB-RXRB »

Tumorportal-RXRB »
COSMIC-RXRB »
GenomeRNAi-RXRB »
Genecards-RXRB


Protein-protein Interactions for RXRB
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait RXRB Cat. description Hein, Mann, Cell 2015
Category members IP bait FLYWCH2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NR1H4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RARA Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RARG Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RXRB
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Retinoid-X_rcpt/HNF4 IPR000003 0
Category members Nucl_hrmn_rcpt_lig-bd_core IPR000536 0
Category members Znf_hrmn_rcpt IPR001628 0
Category members Str_hrmn_rcpt IPR001723 0
Category members Retinoic_acid_rcpt IPR003078 0
Category members Nucl_hormone_rcpt_ligand-bd IPR008946 0


Protein complexes (CORUM database) featuring RXRB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 548 DRIP complex Database 0.08
Category members Corum 549 DRIP complex Database 0.08
Category members Corum 5367 THRB-RXRB complex Database 0


Categories featuring RXRB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members GO Category GO:0010467 gene expression Database INF
Category members GO Category GO:0003713 transcription coactivator activity Database 3.68
Category members Pathway Pathway_308 PID_AR_TF_PATHWAY 0 0.86
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members Pathway Pathway_282 KEGG_NON_SMALL_CELL_LUNG_CANCER 0 0.33
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0006367 transcription initiation from RNA polymerase II promoter Database 0.25
Category members GO Category GO:0001701 in utero embryonic development Database 0.2
Category members GO Category GO:0043565 sequence-specific DNA binding Database 0.18
Category members GO Category GO:0045944 positive regulation of transcription from RNA polymerase II promoter Database 0.13
Category members Pathway Pathway_626 PID_A6B1_A6B4_INTEGRIN_PATHWAY 0 0.09
Category members Pathway Pathway_822 REACTOME_GENERIC_TRANSCRIPTION_PATHWAY 0 0.09
Category members GO Category GO:0004879 ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity Database 0.03
Category members GO Category GO:0044212 transcription regulatory region DNA binding Database 0
Category members Pathway Pathway_24 KEGG_PATHWAYS_IN_CANCER 0 0
Category members Pathway Pathway_283 KEGG_SMALL_CELL_LUNG_CANCER 0 0
Category members Pathway Pathway_40 KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY 0 0
Category members Pathway Pathway_43 KEGG_PPAR_SIGNALING_PATHWAY 0 0
Category members Pathway Pathway_755 PID_RXR_VDR_PATHWAY 0 0
Category members Pathway Pathway_929 REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY 0 0
Category members Pathway Pathway_944 KEGG_THYROID_CANCER 0 0
Category members Pathway Pathway_946 PID_RETINOIC_ACID_PATHWAY 0 0
Category members GO Category GO:0001893 maternal placenta development Database 0
Category members GO Category GO:0003707 steroid hormone receptor activity Database 0
Category members GO Category GO:0004886 9-cis retinoic acid receptor activity Database 0
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0043401 steroid hormone mediated signaling pathway Database 0
Category members GO Category GO:0055012 ventricular cardiac muscle cell differentiation Database 0
Category members GO Category GO:0060038 cardiac muscle cell proliferation Database 0
Category members GO Category GO:0071300 cellular response to retinoic acid Database 0


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