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Query: RLIM

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RLIM 0 -1.587 1.810 -0.920 -0.136

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RLIM Ubiquitylation K550 -0.777 -0.113 _GLTK(gl)EQIDNLAMR_
RLIM Ubiquitylation K582 -0.004 -0.263 _TCSVCITEYTEGNK(gl)LR_
RLIM Phosphorylation S228 -0.682 -0.653 _S(ph)RSPLHPM(ox)SEIPR_
RLIM Phosphorylation S230 -0.901 -0.673 _SRS(ph)PLHPM(ox)SEIPR_

Background Information for RLIM:


Pubmed-RLIM »
Uniprot-RLIM »
Biogrid-RLIM »
ProteomicsDB-RLIM »

Tumorportal-RLIM »
COSMIC-RLIM »
GenomeRNAi-RLIM »
Genecards-RLIM


Protein-protein Interactions for RLIM
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait DNAJB2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RLIM Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RLIM
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_RING IPR001841 0
Category members Znf_C3HC4_RING-type IPR018957 0


Protein complexes (CORUM database) featuring RLIM
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RLIM
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0006511 ubiquitin-dependent protein catabolic process Database 3.57
Category members GO Category GO:0045892 negative regulation of transcription, DNA-dependent Database 1.15
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0017053 transcriptional repressor complex Database 0.28
Category members GO Category GO:0004842 ubiquitin-protein ligase activity Database 0.24
Category members GO Category GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity Database 0.18
Category members GO Category GO:0016567 protein ubiquitination Database 0.07
Category members GO Category GO:0000122 negative regulation of transcription from RNA polymerase II promoter Database 0.02
Category members GO Category GO:0003714 transcription corepressor activity Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


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