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Query: RBM17

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RBM17 1 2.984 -1.230 1.900 -0.359 -0.577 -0.033 -0.049 0.215

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RBM17 Phosphorylation S2 1.665 _(ac)S(ph)LYDDLGVETSDSK_
RBM17 Phosphorylation S222 0.222 -0.079 _S(ph)PTGPSNSFLANMGGTVAHK_
RBM17 Phosphorylation S155 -0.257 -0.289 _RPDPDS(ph)DEDEDYERER_
RBM17 Phosphorylation S169 -1.481 _S(ph)MGGAAIAPPTSLVEK_
RBM17 Phosphorylation T224 0.201 _SPT(ph)GPSNSFLANMGGTVAHK_

Background Information for RBM17:


Pubmed-RBM17 »
Uniprot-RBM17 »
Biogrid-RBM17 »
ProteomicsDB-RBM17 »

Tumorportal-RBM17 »
COSMIC-RBM17 »
GenomeRNAi-RBM17 »
Genecards-RBM17


Protein-protein Interactions for RBM17
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait EMC2 Cat. description Hein, Mann, Cell 2015
Category members IP bait JUNB Cat. description Hein, Mann, Cell 2015
Category members IP bait MMGT1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYO1C Cat. description Hein, Mann, Cell 2015
Category members IP bait PPP3CB Cat. description Hein, Mann, Cell 2015
Category members IP bait XRCC3 Cat. description Hein, Mann, Cell 2015
Category members IP bait RBM17 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait WDFY2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZRSR2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RBM17
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members RRM_dom_euk IPR003954 0.18
Category members G_patch_dom IPR000467 0.09


Protein complexes (CORUM database) featuring RBM17
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 351 Spliceosome Database 9.3
Category members Corum 2755 17S U2 snRNP Database 1.77


Categories featuring RBM17
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0008380 RNA splicing Database 10.77
Category members Pathway Pathway_851 KEGG_SPLICEOSOME 0 7.94
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0005681 spliceosomal complex Database 3.88
Category members GO Category GO:0006397 mRNA processing Database 3.76
Category members GO Category GO:0003676 nucleic acid binding Database 0.83


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