bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: RAB11FIP1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RAB11FIP1 0 2.659 -0.560 0.660 0.252 -0.160 -0.316

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RAB11FIP1 Phosphorylation S435 1.020 0.756 _RSS(ph)LLSLMTGK_
RAB11FIP1 Phosphorylation S357 0.581 0.569 _HLFSS(ph)TENLAAGSWKEPAEGGGLSSDR_
RAB11FIP1 Phosphorylation S545 0.106 0.382 _LEVS(ph)PEAQPTAR_
RAB11FIP1 Phosphorylation S202 0.412 0.117 _DSGSDTASAIIPSTTPSVDS(ph)DDESVVKDK_
RAB11FIP1 Phosphorylation S206 0.063 _DSGSDTASAIIPSTTPSVDSDDES(ph)VVK_
RAB11FIP1 Phosphorylation S199 0.020 _DSGSDTASAIIPSTTPS(ph)VDSDDESVVKDK_
RAB11FIP1 Ubiquitylation K1278 -1.376 -0.051 _IPTQVGK(gl)K_
RAB11FIP1 Phosphorylation S500 -0.343 _QGS(ph)SLNLFEDVQITEPEAEPESK_
RAB11FIP1 Phosphorylation S501 -0.575 -0.343 _QGSS(ph)LNLFEDVQITEPEAEPESK_
RAB11FIP1 Phosphorylation S967 -0.553 _SPIMADLNLSLPSIPEVAS(ph)DDERIDQVEDDGDQVEDDGETAK_
RAB11FIP1 Phosphorylation S528 -0.770 -0.601 _SEPRPPIS(ph)SPR_
RAB11FIP1 Phosphorylation S529 -0.700 -0.667 _SEPRPPISS(ph)PR_
RAB11FIP1 Phosphorylation S356 0.785 _HLFS(ph)STENLAAGSWKEPAEGGGLSSDR_
RAB11FIP1 Ubiquitylation K387 0.499 _QLSESSTK(gl)DSLK_
RAB11FIP1 Ubiquitylation K448 0.061 _DVAK(gl)GSEGENPLTVPGR_
RAB11FIP1 Ubiquitylation K1212 -1.910 _VANCSLGTATIISENLNNEVMMKK(gl)_

Background Information for RAB11FIP1:





Protein-protein Interactions for RAB11FIP1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait BAIAP2 Cat. description Hein, Mann, Cell 2015
Category members IP bait CTBP2 Cat. description Hein, Mann, Cell 2015
Category members IP bait IKBKG Cat. description Hein, Mann, Cell 2015
Category members IP bait KLC1 Cat. description Hein, Mann, Cell 2015
Category members IP bait KLC3 Cat. description Hein, Mann, Cell 2015
Category members IP bait PDGFRA Cat. description Hein, Mann, Cell 2015
Category members IP bait RAB11A Cat. description Hein, Mann, Cell 2015
Category members IP bait RAB11FIP1 Cat. description Hein, Mann, Cell 2015
Category members IP bait RASSF8 Cat. description Hein, Mann, Cell 2015
Category members IP bait PIP4K2A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RAB11A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RAB11B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RAB11FIP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RELT Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RAB11FIP1

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Rab-bd_FIP-RBD IPR019018 0.04
Category members C2_dom IPR000008 0


Protein complexes (CORUM database) featuring RAB11FIP1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 3941 RCP-Rab11 complex Database 0.18


Categories featuring RAB11FIP1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0015031 protein transport Database 3.48
Category members Pathway Pathway_666 KEGG_ENDOCYTOSIS 0 1.25
Category members GO Category GO:0043231 intracellular membrane-bounded organelle Database 0.43
Category members GO Category GO:0030670 phagocytic vesicle membrane Database 0.37
Category members GO Category GO:0055037 recycling endosome Database 0.29


© Copyright Svejstrup Laboratory 2015