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Query: PRDM2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PRDM2 0 -0.381 0.440 -0.560

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PRDM2 Phosphorylation S796 -0.200 -0.181 _ETVS(ph)PPCFDEYK_
PRDM2 Phosphorylation S643 -0.387 -0.415 _TAS(ph)PPALPK_
PRDM2 Phosphorylation S1484 -0.692 _KPLS(ph)PPK_
PRDM2 Phosphorylation S739 -2.045 -0.921 _TSS(ph)PPSSPQHSPALR_

Background Information for PRDM2:


Pubmed-PRDM2 »
Uniprot-PRDM2 »
Biogrid-PRDM2 »
ProteomicsDB-PRDM2 »

Tumorportal-PRDM2 »
COSMIC-PRDM2 »
GenomeRNAi-PRDM2 »
Genecards-PRDM2


Protein-protein Interactions for PRDM2
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait RPL35 Cat. description Hein, Mann, Cell 2015
Category members IP bait CTBP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PRDM2
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_C2H2-like IPR015880 1.29
Category members Znf_C2H2 IPR007087 0.92
Category members SET_dom IPR001214 0.29


Protein complexes (CORUM database) featuring PRDM2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PRDM2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0018024 histone-lysine N-methyltransferase activity Database 0.73
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


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