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Query: PLOD2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PLOD2 0 0.060 0.210 0.170 -0.536 0.258 0.338

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for PLOD2:


Pubmed-PLOD2 »
Uniprot-PLOD2 »
Biogrid-PLOD2 »
ProteomicsDB-PLOD2 »

Tumorportal-PLOD2 »
COSMIC-PLOD2 »
GenomeRNAi-PLOD2 »
Genecards-PLOD2


Protein-protein Interactions for PLOD2
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ANXA2;ANXA2P2 Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPH2 Cat. description Hein, Mann, Cell 2015
Category members IP bait COLQ Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PLOD1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PLOD2
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Nucleotide-diphossugar_trans IPR029044 0.21
Category members Oxoglu/Fe-dep_dioxygenase IPR005123 0
Category members Pro_4_hyd_alph IPR006620 0


Protein complexes (CORUM database) featuring PLOD2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PLOD2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0005789 endoplasmic reticulum membrane Database 1.57
Category members Pathway Pathway_22 KEGG_LYSINE_DEGRADATION 0 0.8
Category members GO Category GO:0005783 endoplasmic reticulum Database 0.62
Category members GO Category GO:0030198 extracellular matrix organization Database 0.26
Category members GO Category GO:0005581 collagen Database 0.19
Category members Pathway Pathway_415 REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION 0 0.09
Category members GO Category GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Database 0.05
Category members GO Category GO:0005506 iron ion binding Database 0.04
Category members Pathway Pathway_414 REACTOME_COLLAGEN_FORMATION 0 0
Category members GO Category GO:0001666 response to hypoxia Database 0
Category members GO Category GO:0006464 cellular protein modification process Database 0
Category members GO Category GO:0008475 procollagen-lysine 5-dioxygenase activity Database 0
Category members GO Category GO:0016491 oxidoreductase activity Database 0
Category members GO Category GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors Database 0
Category members GO Category GO:0030867 rough endoplasmic reticulum membrane Database 0
Category members GO Category GO:0031418 L-ascorbic acid binding Database 0
Category members GO Category GO:0055114 oxidation-reduction process Database 0


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