bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: PELO

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PELO 1 1.061 2.410 -0.720 -0.492 -0.182 0.320 0.293 0.579

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PELO Ubiquitylation K84 -0.130 _VK(gl)GTNIQENEYVK_
PELO Ubiquitylation K270 0.419 -0.240 _LSDTK(gl)AAGEVK_
PELO Ubiquitylation K254 -1.255 _YSLK(gl)EALCDPTVASR_
PELO Ubiquitylation K227 0.673 _EQFCDYMFQQAVK(gl)TDNK_
PELO Ubiquitylation K231 0.656 _TDNK(gl)LLLENR_

Background Information for PELO:


Pubmed-PELO »
Uniprot-PELO »
Biogrid-PELO »
ProteomicsDB-PELO »

Tumorportal-PELO »
COSMIC-PELO »
GenomeRNAi-PELO »
Genecards-PELO


Protein-protein Interactions for PELO
Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in PELO
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members eRF1_1_Pelota IPR005140 0.26
Category members eRF1_2 IPR005141 0.26
Category members eRF1_3 IPR005142 0.26
Category members L30e-like IPR029064 0


Protein complexes (CORUM database) featuring PELO
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PELO
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0051301 cell division Database 1.15
Category members GO Category GO:0007049 cell cycle Database 0.69
Category members GO Category GO:0051276 chromosome organization Database 0.1
Category members GO Category GO:0008283 cell proliferation Database 0.06
Category members GO Category GO:0004519 endonuclease activity Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


.

© Copyright Svejstrup Laboratory 2015