bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: NYNRIN

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
NYNRIN 0 -3.410

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
NYNRIN Phosphorylation S660 -1.993 -1.417 _APAAS(ph)KAPAAPK_

Background Information for NYNRIN:





Protein-protein Interactions for NYNRIN

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CDH8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CRYAB Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM167A Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in NYNRIN

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members KH_dom_type_1 IPR004088 0.13
Category members Integrase_cat-core IPR001584 0
Category members RNaseH-like_dom IPR012337 0
Category members RNase_Zc3h12 IPR021869 0


Protein complexes (CORUM database) featuring NYNRIN

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring NYNRIN

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0003674 molecular_function Database 0.08
Category members GO Category GO:0005575 cellular_component Database 0
Category members GO Category GO:0008150 biological_process Database 0
Category members GO Category GO:0015074 DNA integration Database 0


© Copyright Svejstrup Laboratory 2015