bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: MRPS25

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
MRPS25 0 1.894 0.230 0.060 1.097 0.003 0.277 0.050 0.467

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for MRPS25:





Protein-protein Interactions for MRPS25

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait BRWD3 Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPU Cat. description Hein, Mann, Cell 2015
Category members IP bait MED22 Cat. description Hein, Mann, Cell 2015
Category members IP bait PCDHB15 Cat. description Hein, Mann, Cell 2015
Category members IP bait PCNA Cat. description Hein, Mann, Cell 2015
Category members IP bait ZFC3H1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MRPS11 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MRPS15 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MRPS27 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MRPS31 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MRPS34 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RG9MTD3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRA2A Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in MRPS25

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ribosome/NADH_DH IPR007741 0.22
Category members Thioredoxin-like_fold IPR012336 0.16


Protein complexes (CORUM database) featuring MRPS25

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 320 55S ribosome, mitochondrial Database 0.3
Category members Corum 315 28S ribosomal subunit, mitochondrial Database 0.26


Categories featuring MRPS25

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003735 structural constituent of ribosome Database INF
Category members GO Category GO:0006412 translation Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005840 ribosome Database 12.2
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members GO Category GO:0005763 mitochondrial small ribosomal subunit Database 0.13


© Copyright Svejstrup Laboratory 2015