bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: MRPS17

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
MRPS17 0 0.562 0.900 -0.280 0.363 -0.035 0.223 -0.123 0.134

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for MRPS17:





Protein-protein Interactions for MRPS17

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CEP290 Cat. description Hein, Mann, Cell 2015
Category members IP bait JUP Cat. description Hein, Mann, Cell 2015
Category members IP bait SAMM50 Cat. description Hein, Mann, Cell 2015
Category members IP bait THOC1 Cat. description Hein, Mann, Cell 2015
Category members IP bait VPS16 Cat. description Hein, Mann, Cell 2015


Protein Domains in MRPS17

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members NA-bd_OB-fold IPR012340 4.37
Category members Ribosomal_S17 IPR000266 0.11


Protein complexes (CORUM database) featuring MRPS17

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 320 55S ribosome, mitochondrial Database 0.3
Category members Corum 315 28S ribosomal subunit, mitochondrial Database 0.26


Categories featuring MRPS17

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003735 structural constituent of ribosome Database INF
Category members GO Category GO:0006412 translation Database INF
Category members GO Category GO:0005840 ribosome Database 12.2
Category members GO Category GO:0019843 rRNA binding Database 0.46
Category members GO Category GO:0005622 intracellular Database 0.32
Category members GO Category GO:0005763 mitochondrial small ribosomal subunit Database 0.13


© Copyright Svejstrup Laboratory 2015