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Query: LMNB2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
LMNB2 0 7.423 -0.480 -0.180 0.912 1.309 0.829

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
LMNB2 Ubiquitylation K288 0.800 1.300 _EELK(gl)EAR_
LMNB2 Ubiquitylation K265 0.078 1.270 _LELEQTYQAK(gl)LDSAK_
LMNB2 Phosphorylation S402 1.194 _ATSSSS(ph)GSLSATGR_
LMNB2 Ubiquitylation K103 0.917 1.128 _LQIEIGK(gl)LR_
LMNB2 Phosphorylation S400 1.015 0.953 _ATSS(ph)SSGSLSATGR_
LMNB2 Phosphorylation T498 0.866 _RQVLEGEEIAYKFT(ph)PK_
LMNB2 Ubiquitylation K278 0.240 0.830 _LSSDQNDK(gl)AASAAR_
LMNB2 Phosphorylation S399 1.142 0.767 _ATS(ph)SSSGSLSATGR_
LMNB2 Ubiquitylation K61 0.704 0.753 _ISEK(gl)EEVTTR_
LMNB2 Ubiquitylation K166 0.693 0.289 _AQLAK(gl)AEDGHAVAK_
LMNB2 Ubiquitylation K500 0.029 0.094 _FTPK(gl)YILR_
LMNB2 Phosphorylation S17 -1.177 -0.088 _AGGPAT(ph)PLS(ph)PTR_
LMNB2 Ubiquitylation K270 -0.086 -0.261 _LDSAK(gl)LSSDQNDKAASAAR_
LMNB2 Phosphorylation T14 -1.256 _AGGPAT(ph)PLS(ph)PTR_
LMNB2 Ubiquitylation K113 0.396 _AELDEVNK(gl)SAK_
LMNB2 Ubiquitylation K116 0.462 _AELDEVNKSAK(gl)_
LMNB2 Ubiquitylation K180 0.751 _QLEK(gl)ETLMR_
LMNB2 Phosphorylation S404 1.103 _ATSSSSGS(ph)LSATGR_
LMNB2 Phosphorylation S406 0.617 _ATSSSSGSLS(ph)ATGR_
LMNB2 Ubiquitylation K474 0.084 _NNSDK(gl)DQSLGNWR_

Background Information for LMNB2:


Pubmed-LMNB2 »
Uniprot-LMNB2 »
Biogrid-LMNB2 »
ProteomicsDB-LMNB2 »

Tumorportal-LMNB2 »
COSMIC-LMNB2 »
GenomeRNAi-LMNB2 »
Genecards-LMNB2


Protein-protein Interactions for LMNB2
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait KDM3B Cat. description Hein, Mann, Cell 2015
Category members IP bait LEO1 Cat. description Hein, Mann, Cell 2015
Category members IP bait LMNA Cat. description Hein, Mann, Cell 2015
Category members IP bait TUBG1 Cat. description Hein, Mann, Cell 2015
Category members IP bait FNTB Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in LMNB2
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Lamin_tail_dom IPR001322 0.9
Category members IF IPR001664 0
Category members Prefoldin IPR009053 0


Protein complexes (CORUM database) featuring LMNB2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring LMNB2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005635 nuclear envelope Database 7.22
Category members GO Category GO:0005637 nuclear inner membrane Database 1.98
Category members Pathway Pathway_962 BIOCARTA_FAS_PATHWAY 0 1.75
Category members GO Category GO:0005652 nuclear lamina Database 1.08
Category members GO Category GO:0005198 structural molecule activity Database 0.94
Category members GO Category GO:0005638 lamin filament Database 0.89
Category members Pathway Pathway_963 BIOCARTA_TNFR1_PATHWAY 0 0.44
Category members Pathway Pathway_961 PID_CASPASE_PATHWAY 0 0.19
Category members Pathway Pathway_960 BIOCARTA_HIVNEF_PATHWAY 0 0.17
Category members GO Category GO:0003674 molecular_function Database 0.08
Category members Pathway Pathway_965 BIOCARTA_CASPASE_PATHWAY 0 0.01
Category members GO Category GO:0005882 intermediate filament Database 0
Category members GO Category GO:0008150 biological_process Database 0


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